Agreia sp. COWG: AGREI_2678
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Entry
AGREI_2678 CDS
T07018
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
agx
Agreia sp. COWG
Pathway
agx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGREI_2678 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agx03019
]
AGREI_2678 (recQ)
03400 DNA repair and recombination proteins [BR:
agx03400
]
AGREI_2678 (recQ)
Enzymes [BR:
agx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AGREI_2678 (recQ)
Messenger RNA biogenesis [BR:
agx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AGREI_2678 (recQ)
DNA repair and recombination proteins [BR:
agx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AGREI_2678 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
CAD6006355
LinkDB
All DBs
Position
COWG:complement(2634251..2636341)
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AA seq
696 aa
AA seq
DB search
MVGGWAEAGWVEGGGLLPDAAGKLERVTWNADIPWDPEAEPPPLDEEPPYDPFYDEGPPP
RQADGTAQARGAAAQGAAVAAAPTVASPPSVETALEALQRVFGYDAFRGDQAAIIQNVID
GGDTVVLMPTGGGKSLCYQIPSLVRRGTGIVVSPLIALMQDQVDALTAVGVRAAFLNSTQ
DAGERTRVENAYLAGQLDLLYVAPERLSNEATKRFLARGEIALFAIDEAHCVSQWGHDFR
PDYLALGELAERWPNVPRIALTATATEATHAEITERLGMQQAKHFVASFDRPNIRYRIEN
KGEVRRQLLSLIQGEHPNDSGIVYALSRNTVEKTAQFLSDNGLKALPYHAGLDSRLRAST
QSRFLREDGIIIVATIAFGMGIDKPDVRFVAHVDLPKSVEGYYQETGRAGRDGLPSTAWL
AYGLQDVVQQRRMIDESPGDLAHRRRLSAHLDAMLALCETVHCRRVNLLGYFGQESTPCG
NCDTCLEPPESWDGTIAAQKLLSTVVRLARERNQRFGAGQLVDILRGKVTDRVTQLNHQS
LSTWGIGQDLSEQQWRGVVRQLLAQGLLAVNDDGYGTLVVTEASGEVLAGRHPVSMRREA
ERAARSVRSSGSSKSKAATAQLAPADQELFEKLRAWRAGQAREQEVPAYIVFGDATLRAV
ATARPTTLAEAGGITGIGEAKLSKYGEALLEVVAAG
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtggtgggcggatgggcggaggccggatgggtggagggcggcgggctcttgccggatgcc
gccggtaaactcgaacgcgtgacgtggaacgctgacatcccctgggaccctgaagcggaa
ccgcctcccctcgatgaggaaccgccctacgatccgttctacgacgaggggcctccgcct
cggcaggccgatggaacggcgcaggcccggggtgcggcggcccagggggcggcagtcgca
gcggcaccgaccgtcgcttcgccgccctccgtggagaccgcgctcgaggcgctgcagcgg
gtcttcgggtatgacgcattccgcggagatcaggccgcgatcatccagaacgtgatcgac
ggcggcgacacggtggtgctgatgcccaccggtggcggcaagtccctctgctatcagatc
ccctctctcgtgcgccggggcacgggcatcgtggtctcaccgctcatcgcgctgatgcaa
gaccaggtcgacgccctcaccgcggtcggcgtgcgcgccgcgttcctgaactcgacccag
gatgccggcgagcgcacccgggtcgagaacgcctacctcgccggccagctcgaccttctc
tacgtggcgcccgagcggctgtcgaacgaggccacgaagcgcttcctcgcccgtggcgag
atcgcgctgttcgccatcgacgaggctcactgcgtgtcgcagtgggggcacgacttcagg
cccgactacctcgcactgggcgagctcgcggagcgctggccgaatgtgccccgcatcgcc
ttgaccgccaccgccaccgaggcaacacacgccgagatcaccgagcgcctcggcatgcag
caggccaagcacttcgtggccagcttcgatcgtcccaacatccgctaccgcatcgagaac
aagggagaggtgagacggcagctgctgtcgctcatccagggcgagcacccgaacgactcg
ggcatcgtctacgccctctcgcgtaatacggtcgagaagaccgcccagttcctcagcgac
aacggcctcaaggcgctgccgtaccacgccggactcgactcgcggctgcgcgcgtccacc
cagtcccgcttcctgcgagaagacggcatcatcatcgtggccacgatcgccttcggcatg
ggcatcgacaagcccgatgtgcgtttcgtcgcgcacgtcgacctgcccaagagcgtcgag
ggctactaccaggagacgggacgcgcgggtcgagacgggctgccgtcgacggcttggctc
gcctacggcctgcaagacgtcgtgcagcagcgccgcatgatcgacgagtcgccgggcgac
ctcgcccatcgccgtcgcctctcggctcacctcgacgcgatgctcgccctctgcgagacc
gtacactgccgccgcgtcaacctgctcggctacttcggccaggagtccacgccgtgcggc
aactgcgatacctgcctcgagccgcccgagtcgtgggacggcacgatcgccgcccagaag
ctcctctccaccgttgtgcgcctcgcgcgggagcgcaaccagcgcttcggtgccgggcag
ctcgtcgacatcctgcgaggcaaggtcaccgacagggtcactcagctgaaccaccagagc
ctgtcgacatggggcatcgggcaagacctcagcgagcagcagtggcgcggcgtcgtgagg
cagctgctggcccaggggctgctcgccgtgaacgacgacggctacggaaccctggtggtg
accgaggcgagcggcgaggtcctcgccggcaggcatccggtgtcgatgcggcgcgaggcc
gagcgtgcggcccgcagtgtgcggtcgtctggctcctcgaagtcgaaggctgcgaccgcg
caactcgcccccgcagaccaggagctgttcgagaagctgcgcgcctggagggcagggcag
gcccgcgagcaggaagtccccgcgtatatcgtcttcggggatgcgaccctcagagccgtc
gccacggccaggccgacgacgctcgccgaggccggcggcatcaccggaatcggagaggcg
aagctgtcgaagtacggcgaggccctgctcgaggtcgtcgcagccggctag
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