Agreia sp. COWG: AGREI_2882
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Entry
AGREI_2882 CDS
T07018
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
agx
Agreia sp. COWG
Brite
KEGG Orthology (KO) [BR:
agx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agx03400
]
AGREI_2882
DNA repair and recombination proteins [BR:
agx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AGREI_2882
Archaeal homologous recombinant proteins
AGREI_2882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_27
AAA_15
ABC_tran
AAA_21
nSTAND3
CsgF
Motif
Other DBs
NCBI-ProteinID:
CAD6007801
LinkDB
All DBs
Position
COWG:complement(2854995..2858171)
Genome browser
AA seq
1058 aa
AA seq
DB search
MRINRLTIAGFGPYKTAQTIDFDAFDDDGIFLITGNTGAGKSSILDAICFALYAGVPRYD
GTQQQLRSDYCEPADPTYVELWFGAGGKSYRVKRSPEYEQPKRRGEGTTKRPTTAELFVR
VGAGGAGGDDEGEWHGLAAIPRDVAAELDGILGLSKDQFLQVILLAQNRFQKFLHAKNDE
RQAVLQSLFGTRRFADIERALVERRKTLEARQAGARDALGRVAHEVASIVDAHVAAAALA
RSEGSDAGSERDAQTAAQSEPRTSVVPEAPDEAWFAAALEAVESDVEAATRRVIGADEAF
DRADAALRELENTRRLQTRRDEASARLVELERSDDDIDDSRSRVEAAGRAEIVWAHVAAV
AGARQQFETAAGHEDDARSDYVELRPADEAEAEAEAGAGAGAGAGAGADEAEADVAQGAP
ASSPARLAAQADDVTRRLGALESALADEARLPAVQKEIGAHDKALQQHERELAAALARAQ
SLPAELDEVAELRDAALVAAAARPAAAERLARLGEQRRAALLVDTLSEQLDVAHAAEKTR
VAAGMEALERYDAILTRRLDGHASELASTLVDGTPCMVCGSTSHPAPTSWSAELGEPVSD
ADLEEARLEQRRAADALAEAGLVVQRASAARAAAEASAGGLTVTDIDAELDAARAVEADA
ARAEADAQSLATRSSGLRAAIDATSAELASLGTAGETIRTALAAARAESAAITERLAEHR
GGFSTVAARVERLQLVLETTRAYAEALTVVAEKKRALAQADATLREHLAEQGFADADQAI
AARMTPAQRAALVSAISAHDLAAGTARATLAESELQSLPAMLVDLDDAIASRTAAREARD
AARIAASALDERVMRVRTLVTDALARLQASEALRLEFETLRSLANSVEGNEPNTMRMRLE
SYVLAAQLEQIILAANARLATMTNGRYTLEHDDSIQYRKAQSGLGIAILDEHTGRARATH
SLSGGETFLASLALALGLAEVVSNQAGGITLDTLFIDEGFGSLDADTLAIAMSTLDSLRA
GGRTIGLISHVEAMKEQIPSRLRIHVTPQGWSEIDQRS
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcaaccgactcaccattgcgggcttcggcccgtacaagaccgcccagaccatc
gacttcgacgccttcgacgatgacggcatctttttgatcacgggcaacacgggggcgggc
aagtccagcatcctcgacgcgatctgctttgcgctctacgcgggagtgccacgctacgac
ggcacgcagcagcagctgcgcagcgactactgcgaaccggcagaccccacctatgtcgag
ctgtggttcggggcgggcggcaagagctatcgggtgaagcgctcgcccgaatacgagcag
cccaagaggcggggcgagggcaccaccaagagacccacgaccgcggagctcttcgtgcgg
gtgggcgcggggggcgcgggaggcgacgacgagggcgagtggcacggcctcgccgccatt
ccacgcgatgtcgcggcagagctcgacggcatcctcgggctcagcaaagaccagttcctg
caggtgatcctgcttgcgcagaaccgttttcagaagtttctgcacgccaagaacgacgag
cgtcaggccgttctgcagagcctgttcggcacccgacggttcgccgatatcgagagggcg
ctcgtcgaacggcgaaagacgctcgaggctcggcaggccggcgcgcgcgacgccctcggc
cgggtggcgcacgaggtcgcatcgatcgtcgatgcacacgtggcggcggccgcgctggcg
cgatccgaggggtccgacgcaggctcagagagagacgcgcagactgctgcgcaatctgag
ccgcggacctccgtcgtgccggaggctcccgacgaggcctggttcgccgcggcgctcgag
gcggtcgagagcgacgtcgaggcggccacgcggcgggtgatcggggccgacgaggcgttc
gatcgtgccgacgcggccctgcgcgagctcgagaacacacggcggctgcagacgagacga
gacgaggcgtctgcccgcctggtcgagctcgagcgcagcgacgatgacatcgacgacagc
cgttcgcgggtcgaggcggcgggccgcgccgagatcgtgtgggcgcacgtcgcggcggtc
gcgggagcgcgccagcagttcgagacggctgcgggccacgaagacgatgcgcgctcagac
tacgtcgagctccgaccggcagatgaggcagaggcagaggcagaggctggtgctggtgct
ggtgctggtgctggtgctggtgctgatgaggccgaggccgacgtcgcacagggcgcacct
gcctcctcgccggcacggctcgccgcccaggccgacgacgtcacccgcaggctcggcgcc
ctggagtccgcactggccgatgaggcgcggctgcccgcggtgcagaaagagatcggcgcg
catgacaaggcgctacagcagcacgagagagaactcgccgccgcgctcgcccgcgcacag
tcgttgccggcagaactcgacgaggtcgccgaactgcgagacgcggcactcgtggcggcc
gccgctcggcctgcggccgccgagcggctcgcgcgcctgggagagcagcgcagagcggcg
cttctcgtcgacaccctcagcgaacagctcgatgtcgcccatgccgcagagaagacccgc
gtcgccgccggtatggaggccctcgagcgctacgacgccattctcacccgtcggctcgac
ggccacgcctccgagctggcctccacgctggtcgacggcactccgtgcatggtctgcggg
tcgacgtcgcatcccgcccccacgtcgtggtcggccgagctcggcgagccggtctccgat
gccgacctcgaggaggctcgtctcgagcagaggcgcgctgcagacgcgctggcggaggcc
gggctcgtggtgcagcgcgcatccgccgctcgtgccgcggccgaggcgtctgccggcggt
ctcaccgtgaccgacatcgatgccgaactcgacgccgcgcgggcggtcgaagccgacgcc
gcacgggccgaggccgacgcgcagagtctcgcgacgcgctcgagcgggctgcgggcggcc
atcgatgcgacctcggccgagctggcgagcctcggcaccgcgggcgaaacaatccgaaca
gcgctcgctgcggcgcgtgccgagagcgccgcgatcaccgagcggctggccgaacatcgc
ggcggcttctccaccgtggcggcccgcgtcgagcggctccagctcgttctcgagacgacg
cgcgcctatgccgaggccctcaccgtcgtggctgagaagaagagggcgctcgcccaggcc
gatgccacccttcgagaacacctggcagagcagggcttcgccgacgccgaccaggccatc
gccgcacgcatgaccccggcgcagcgagccgccctcgtctcggccatcagcgcccacgat
ctggccgcgggaaccgctcgagccaccctggccgagagcgagctgcagtcgctcccggcg
atgctcgtcgatctcgacgacgcaatcgcatcgcgaacggccgcgcgcgaggcgcgcgac
gcggcgaggatagcggcgagcgctctcgacgagcgggtgatgcgggtgcgcaccctggtg
acggatgcgctggcccggctgcaggcatccgaggccctgcggctcgagttcgagaccctg
cgatcgctcgccaactcggtggagggcaacgagccgaacaccatgcgcatgcgactggag
tcgtacgtgctcgcggcccagctcgagcagatcattctggcggcgaacgcgcgactggcc
accatgaccaacggccgctacaccctcgagcacgacgattccatccagtaccgcaaggcg
cagtctgggctcggcatcgccattctcgacgagcacaccgggcgcgcacgggccacgcac
tcgctgtcgggtggtgagacctttctggcgtcgctcgccctggcgctcggcctcgccgag
gtggtctcgaaccaggccgggggcatcaccctcgacacgctgttcatcgacgagggcttc
ggctcgctcgacgcagacacgctcgccatcgccatgtcgaccctcgattcgctgcgcgcg
ggtggtcgaacgatcggcctcatcagccacgtcgaagcgatgaaagagcagatcccgtcg
cggctgcgcatccacgtcacgccgcagggctggtctgagatcgaccagcgctcgtag
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