Agromyces aureus: ATC03_13600
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Entry
ATC03_13600 CDS
T04413
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
agy
Agromyces aureus
Pathway
agy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATC03_13600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agy03021
]
ATC03_13600
03019 Messenger RNA biogenesis [BR:
agy03019
]
ATC03_13600
Transcription machinery [BR:
agy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ATC03_13600
Messenger RNA biogenesis [BR:
agy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ATC03_13600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
HeH
AAA_22
NACHT
Motif
Other DBs
NCBI-ProteinID:
ANJ28944
UniProt:
A0A191WL58
LinkDB
All DBs
Position
complement(3030541..3032724)
Genome browser
AA seq
727 aa
AA seq
DB search
MSAANRTRLTTLKVAELQELAASLGISGASKRRKGELVDLISAHQIGEAPDVETPDAVDA
PPVEAPAAEAPVAEAVEAPAAVAEAAAPAADEVAAAPVEAPVDEAPAAEPEAPAAPARTR
QGRQPRRATSATTAAAQHANAGASGVDLVPAASGTDSDEAREAARAAVREELAAATGEAG
RAPQADAEGEQAADQPRQGRSRNRGRRGGERERAERTGEDAQKGADAQGQGRQNGQNAQN
GNTQNGNTQNGNGQGGNGNAEPRKADEQGGRQPRERQGADAEAKQGGENRQQGQQSRGGN
AEALDADGGRRNRYRDRKRRGQTGGDELEPEVLDDDVLIPIAGILDVLDNYAFVRTTGYL
PGPSDVYVSLGQVKKYNLRKGDAVVGSIKQPRDGESNSRQKYNALVKVDSVNGQTIEESG
ARVEFQKLTPLYPQERLRLETEPTKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQI
ANAISINNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAK
RLVELGHDVVVLLDSITRLGRAYNLAAPTSGRILSGGVDASALYPPKRFFGAARNIENGG
SLTILATALVETGSKMDEVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEML
LSPDEVKITWKLRRALAGLDQQPALEAVLGRLKETQSNVEFLMLMQKSMPVGANGHGASH
ANEHDHR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
ctgagcgcggcgaaccgcacccgactcaccaccctgaaggtggccgaactccaggagctc
gccgcctcgctcggcatctccggcgcctccaagcgccgcaagggcgagctcgtggacctg
atctcggcccaccagatcggcgaggcccccgacgtcgagacgcccgacgccgtcgacgcg
ccgccggtcgaggctcccgccgccgaggcccccgtcgccgaggccgtcgaggcccccgca
gccgtcgccgaggcggcggccccggccgccgacgaggtcgcagccgcgcccgtcgaggcg
ccggtcgacgaggcgcccgccgccgagcccgaggcgcccgccgctccggcgcgtacccgt
cagggtcgccagccgcgccgcgcaacgagcgcgaccactgcggccgcccagcacgcgaac
gccggcgcctccggcgtcgacctcgtgcccgcggcatccggcaccgacagcgacgaggcc
cgcgaggccgcccgcgccgccgtgcgcgaggagctcgcggccgcgaccggcgaggccggc
cgcgccccccaggccgacgccgagggcgagcaggcagccgaccagccccgccagggtcgc
agccgcaaccgcggtcgccgcggtggagagcgcgagcgcgccgagcgcacgggcgaggac
gcgcagaagggcgccgacgcgcagggccagggtcgtcagaacgggcagaacgctcagaac
ggcaacacccagaacggcaacacccagaacggcaacggccagggcggcaacggcaacgcc
gagccgcgcaaggccgacgagcagggcggccgccagccgcgcgagcgccagggcgccgac
gccgaggccaagcagggcggcgagaaccgccagcagggtcagcagagccgaggcggcaac
gccgaggcgctcgacgccgacggcggccgtcgcaaccgctaccgcgaccgcaagcgtcgc
ggccagaccggcggcgacgagctcgagcccgaggtcctcgacgacgacgtgctgatcccc
atcgcgggcatcctcgacgtgctcgacaactacgcgttcgtgcgcacgacgggttacctg
cccggcccgagcgacgtctacgtctcgctcggccaggtcaagaagtacaacctgcgcaag
ggcgacgcggtcgtcggctcgatcaagcagccgcgtgacggcgagtcgaacagccgccag
aagtacaacgccctcgtcaaggtcgactcggtgaacggccagaccatcgaggagtcgggc
gcgcgcgtcgagttccagaagctcacgccgctctacccgcaggagcgcctgcgcctcgag
accgagcccaccaagctcacgcagcgcatcatcgacctcgtcgcacccatcggcaagggc
cagcgcggcctcatcgtcgcgcccccgaaggcgggcaagacgatagtgctgcagcagatc
gcgaacgccatctcgatcaacaaccccgaggtccacctcatggtcgtgctcgtcgacgag
cgccccgaagaggtcaccgacatgcagcgcacggtcaagggcgaggtcatcgcctcgacg
ttcgaccgtccggccgaagaccacacgacggtcgccgaactcgccatcgagcgtgcgaag
cgactcgtcgagctcggccacgacgtcgtcgtgctgctcgactcgatcacccgcctgggc
cgcgcctacaacctggccgcacccacctcgggccgcatcctctcgggcggcgtcgacgcc
tcggcgctctacccgccgaagcgcttcttcggcgcagcgcgcaacatcgagaacggcgga
tccctcacgatcctcgcgaccgcgctcgtggagaccggctccaagatggacgaggtcatc
ttcgaggagttcaagggcaccggcaactccgagctccgcctctcgcgccagctcgccgac
aagcgcatcttcccggcggtcgacgtcaacgcgtcgtccacccgccgcgaggagatgctg
ctgagccccgacgaggtcaagatcacgtggaagctgcgtcgtgccctcgcgggcctcgac
cagcagcccgcgctcgaggccgtgctgggccgcctgaaggagacccagtccaacgtcgag
ttcctgatgctcatgcagaagtcgatgccggtgggggccaacggccacggggcatcgcac
gcgaacgagcacgaccaccgctga
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