Agromyces aureus: ATC03_15490
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Entry
ATC03_15490 CDS
T04413
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
agy
Agromyces aureus
Pathway
agy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ATC03_15490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agy03021
]
ATC03_15490
03400 DNA repair and recombination proteins [BR:
agy03400
]
ATC03_15490
Enzymes [BR:
agy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ATC03_15490
Transcription machinery [BR:
agy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ATC03_15490
DNA repair and recombination proteins [BR:
agy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ATC03_15490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ANJ27909
UniProt:
A0A191WIA2
LinkDB
All DBs
Position
complement(3458560..3462456)
Genome browser
AA seq
1298 aa
AA seq
DB search
MLDATTFDELRIGLATADDIRKWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVIDVDDEGRHADMPGLENEIRLEIKTIGDQRDARIATLMVRKEEE
LAALEADGAKSDVRKRAEAAADKEMTGVRKSADEQVAHLERVWEDFRTLKVGDLKPEDAV
FHELQDRYSMYFTAFMGAEAIKKRLLAFDLAAEAEDLRLQIAEGKGQKKIRAIKRLRVVS
SFLATGNSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLSHAQNIKAAKRMVERSN
PHVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPTQDMIIGLHHLTTEKAGAAGEGR
AFSSIAEAILAFDQNKPGEIALDLNAKVRIRLDGVHFAEGEAPEKFVEGKPFLMETTLGR
ALFNEALPVDYPFFNEQAGKGQISAIVNDLAERYPKTEVAATLDRIKDAGFRWATRSGVT
VALSDILTPPSKGEIVARYEKLATKVQSQFEKGLTTDLERRQELIQIWTKATDEVAKAMQ
ENFPTDNTINRMVTSGARGNWLQVRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYF
IATHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTGKGLELPIGTVDAAGEL
VRDPNVENSVFARSLAADAVNDKGEVVAEAGEDVGDVLIDKLIAAGVGTIKVRSVLTCES
AVGVCAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGL
PRVQELFEARTPKGASPIVEAAGRITIDETDRQRKVILTPDNGDEPIAYNVLKRSTLLVE
DGQHVELGQQLIVGAVDPKEVLRVKGVREVQKHLVDGVQGVYRSQGVPIHDKHIEVIVRQ
MLRKVTVVDHGDTDLLPGELVDRSKYQEINRATITEGKKTASARQEVMGITKASLATESW
LSAASFQETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLNRYRNVAVEATDEAKA
ERYPNRIFTDDAAFTEGDLSFVDFDAFSNDDFTPGNYS
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgcaaccacatttgacgagcttcgcattggcctggcgaccgccgacgacatc
cgcaagtggtcttacggtgaggtcaagaagcccgagaccatcaactaccgcaccctgaag
cccgagaaggacggtctgttcggtgagcagatcttcggaccgagccgtgactgggagtgc
gcgtgcggcaagtacaagcgcgtgcgcttcaagggcatcgtgtgcgagcgctgcggcgtg
gaggtcaccaagtcctccgtgcgtcgtgagcgcatgggccacatcgagctcgccgctccc
gtgacccacatctggtacttcaagggtgttccctcgcgcctcggctacctgctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgcggcctacatggtcatcgacgtcgac
gacgagggtcgtcacgccgacatgcccggcctcgagaacgagatccgtctcgagatcaag
accatcggcgaccagcgcgatgcccgcatcgcgacgctcatggtgcgcaaggaggaggag
ctcgcggccctcgaggccgacggtgcgaagtccgacgtgcgcaagcgcgccgaggccgcc
gccgacaaggagatgaccggcgtccgcaagtcggccgacgagcaggtcgcgcacctcgag
cgcgtgtgggaggacttccgcaccctcaaggtcggcgacctcaagcccgaggacgccgtc
ttccacgagctccaggaccgctacagcatgtacttcaccgccttcatgggcgctgaggcc
atcaagaagcgcctgctcgcgttcgacctcgcggccgaggccgaagacctgcgcctgcag
atcgccgagggcaagggtcagaagaagatccgcgccatcaagcgactgcgcgtcgtgagc
tccttcctcgcgaccggcaactcgccggccgcgatggtgctcgacgtggttccggtgatc
ccgccggagctccgcccgatggtgcagctcgacggtggccgcttcgcgacctccgacctc
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgtcttcgtcgtctgctcgacctc
ggtgcccccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggtcgtcgtggtcgcccggtcacgggtaccggcaaccgcgccctcaag
tccctgagcgacatgctcaagggcaagcagggtcgcttccgtcagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaagcagatggcgctggagctcttcaagccgttcgtgatcaagcgcctg
atcgacctgagccacgctcagaacatcaaggccgccaagcgcatggtcgagcgctcgaac
ccgcacgtgtgggacgtcctcgaggagatcatccgcgagcgccccgtgctgctgaaccgt
gcacccaccctgcaccgtctcggcatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagctccacccgctcgtgtgcgcggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgtcggtcgaggcccaggccgaggcgcgcatcctgatgctc
gcgtcgaacaacatcctgaagccgtccgacggtcgaccggtgaccctgcccacgcaggac
atgatcatcggcctgcaccacctgacgaccgagaaggccggcgcggccggcgagggccgt
gcgttctcgtcgatcgccgaggcgatcctcgcgttcgaccagaacaagccgggcgagatc
gcactcgacctcaacgcgaaggtgcgcatccgtctcgacggcgtgcacttcgccgagggc
gaggctcccgagaagttcgtcgagggcaagccgttcctgatggagaccacgctcggtcgt
gcgctcttcaacgaggcgctcccggtggactacccgttcttcaacgagcaggccggcaag
ggccagatctcggcgatcgtcaacgacctcgccgagcgctacccgaagaccgaggtcgcc
gcgaccctcgaccggatcaaggacgccggcttccgctgggcgacccgttcgggcgtgacc
gtcgcgctctccgacatcctgaccccgcccagcaagggcgagatcgtcgcgaggtacgag
aagctggccacgaaggtgcagtcgcagttcgagaagggtctcacgaccgacctcgagcgt
cgtcaggagctcatccagatctggaccaaggccaccgacgaggtcgccaaggccatgcag
gagaacttcccgaccgacaacaccatcaaccgcatggtcacgtcgggcgcccgtggtaac
tggctccaggttcgcaacatcgccggtatgcgcggtctcgtgaacaaccccaagggtgag
atcatcccccgtccgatcatctcctcgtaccgcgagggtctgtcggtggcggagtacttc
atcgcgacgcacggtgcccgcaagggtctggccgacacggccctccgtaccgccgactcg
ggctacctcacgcgtcgactcgtcgacgtctcgcaggatgtcatcatccgcgaggaggac
tgcggcaccggcaagggcctcgagctccccatcggcaccgtcgacgccgcgggcgagctc
gtccgcgacccgaacgtcgagaactcggtgttcgcccgttcgctcgcggctgacgccgtg
aacgacaagggcgaggtcgtcgccgaggccggcgaagacgtgggcgacgtgctcatcgac
aagctcatcgcggcaggcgtgggcaccatcaaggtgcgctcggtcctgacctgcgagtcg
gccgtcggtgtctgcgcgaagtgctacggccgttcgctcgcgaccggcaagctcgtcgac
atcggcgaggccgtcggcatcatcgcggcccagtcgatcggcgagcccggcacgcagctc
accatgcgtaccttccacaccggtggttcggcttcggccgacgacatcacgcagggtctt
ccccgcgtgcaggagctcttcgaggcgcgtacccccaagggtgcgtcgcccatcgtcgag
gccgccggtcgcatcacgatcgacgagaccgaccgccagcgcaaggtcatcctcacgccc
gacaacggcgacgagccgatcgcgtacaacgtgctcaagcgttcgaccctcctggtcgaa
gacggacagcacgtcgagctcggccagcagctgatcgtcggcgccgtcgacccgaaggaa
gtcctccgggtcaagggcgtgcgtgaggtgcagaagcacctcgtcgacggcgtgcagggc
gtctaccgctcgcagggtgtgccgatccacgacaagcacatcgaggtcatcgtgcgccag
atgctgcgcaaggtcaccgtcgtcgaccacggcgacaccgacctgcttccgggtgagctg
gtcgaccggtcgaagtaccaggagatcaaccgcgccacgatcaccgagggcaagaagacg
gcctcggctcgtcaggaggtcatgggtatcaccaaggcttcgctcgcgaccgagtcgtgg
ctgtcggccgcgtccttccaggagacgacccgcgtgctcacgcaggccgccatggagggc
aagtccgacccgctggtcggcctcaaggagaacgtgatcatcggaaagctgatccccgcg
ggcaccggtctgaaccggtaccggaacgtcgcggtcgaggcgaccgacgaggcgaaggcg
gagcggtaccccaaccgcatcttcaccgacgacgccgcgttcaccgagggcgacctgagc
ttcgtcgacttcgacgcgttctcgaacgacgacttcacgcccggcaactacagctag
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