Agromyces aureus: ATC03_17240
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Entry
ATC03_17240 CDS
T04413
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
agy
Agromyces aureus
Pathway
agy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATC03_17240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agy03019
]
ATC03_17240
03400 DNA repair and recombination proteins [BR:
agy03400
]
ATC03_17240
Enzymes [BR:
agy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATC03_17240
Messenger RNA biogenesis [BR:
agy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ATC03_17240
DNA repair and recombination proteins [BR:
agy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ATC03_17240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HEM4
Glyco_transf_4
KORA
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
ANJ28188
UniProt:
A0A191WJ37
LinkDB
All DBs
Position
3855681..3857807
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AA seq
708 aa
AA seq
DB search
MTHADPVPSDLHAAALGALRELVGRDDATFHDGQFEAIRALVEGRRRALVVQRTGWGKSA
VYFVATLLLRREGAGPTVLVSPLLALMRDQIAAAERAGVRAVAINSTNAHEWADVLAALD
RDEVDVLLVSPERLNNPSFREQQLPALVQRMGMLVVDEAHCISDWGHDFRPDYRRLRDLI
AQMPASVPVLATTATANSRVVADVAEQLGSTAAGGDAGEGVLTIRGPLARTSLRLGVLRL
PDSASRLAWLLSHLDDLPGSGIIYTLTVSAATDIARVLRERGHEVRAYTGQTDPDEREES
EGMLKRNEVKALVATSALGMGFDKPDLGFVLHLGAPSSPVAYYQQVGRAGRASESADVLL
MPGTEDRAIWHYFATASMPDEERAHRVIGELSDVPLSTPALEARVDIRRTPLELLLKVLD
VDGAVRRVSGGWVATGEPWRYDAERYARIAAEREAEQQHMIDYEQTDGCRMEFLQRSLDD
ETAAPCGRCDNCAGVWYPGDLAEGAAEAASGALDRVGVPVEPRKAWPTGADRLGVPVKGR
IAPGEQAGEGRALARLTDLGWGGTLREVFAAGAPDAPVNPQMLDACVRVLADWGWAERPV
AVVSMPSRSHPELVRSLAEGLARIGRLPYLGALAPANGGPSGQPGGNSAFRLAGVWQRFS
TEGLDVPSGGVLLVDDLADSKWSLTVAARELRLAGATSVLPFVLALRG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgacccatgcagaccccgtgccctccgacctgcatgcggcggcgctcggcgccctgcgc
gaactcgtggggcgcgacgacgcgaccttccacgacgggcagttcgaggcgatccgggcg
ctcgtcgaggggcgcaggcgggcgctcgtggtgcagcgcacgggctggggcaagtcggcg
gtgtatttcgtcgcgacgctgctgctgcggcgcgagggggccgggccgaccgtgctcgtc
tcgccgctgctcgccctcatgcgcgaccagatcgcggccgccgagcgggcgggcgtgcgc
gcggtggccatcaactcgacgaacgcgcacgagtgggccgacgtgctggcggcgctcgac
cgcgacgaggtcgacgtgctgctcgtctcccccgagcgcctgaacaacccgtcgttccgc
gagcagcagctgccggcgctcgtgcagcgcatgggcatgctcgtcgtcgacgaggcgcac
tgcatcagcgactggggccacgacttccggcccgactaccggcgcctgcgcgacctcatc
gcgcagatgccggcctcggtgcccgtgctcgcgaccacggccacggccaacagccgggtc
gtggcggatgtcgccgagcaactcgggtcgaccgcggccggcggtgatgcgggcgagggc
gtgctcacgatccgcgggcccctcgcccgcacctcgctgcgcctcggcgtgctgcgactg
cccgactcggcgagccggctcgcgtggctgctcagccacctcgacgacctgccggggtcg
ggcatcatctacacgctcacggtgtcggccgcgaccgacatcgccagggtgctgcgcgag
cgaggccacgaggtgcgcgcctacacggggcagaccgatcccgacgagcgcgaggagtcc
gagggcatgctgaagcgcaacgaggtcaaggcgctcgtggccacgagcgcgctcggcatg
ggcttcgacaagcccgacctcgggttcgtgctgcacctcggcgccccgtcgtcgcccgtc
gcgtactaccagcaggtcggccgcgcaggccgtgcgagcgagagcgccgacgtgctgctc
atgcccggcaccgaagaccgtgcgatctggcactacttcgccacggcgtcgatgcccgat
gaggagcgcgcgcaccgggtcatcggcgagctgtcggacgtgccgctgtcgacgccggcg
ctcgaggccagggtcgacatccgccgcaccccgctcgagctcctgctcaaggtgctcgac
gtcgacggcgcggtgcgtcgcgtgtcgggcgggtgggtcgccaccggcgagccgtggcgg
tacgacgccgagcggtacgcgcgcatcgcggccgagcgcgaggccgagcagcagcacatg
atcgactacgagcagactgacggctgccgcatggagttcctccagcgctcgctcgacgac
gagacggcggcgccctgcggccgctgcgacaactgcgccggcgtctggtacccgggcgac
ctcgccgagggcgcggccgaggcggcatccggagccctcgatcgcgtcggcgttcccgtc
gagccgcgcaaggcgtggccgaccggcgccgaccggctcggcgtgcccgtcaagggccgc
atcgccccgggcgagcaggccggcgagggccgggcgcttgcgcgtctgaccgacctcggc
tggggcggcacgctccgcgaggtcttcgcggcgggtgcgcccgacgcaccggtcaacccc
cagatgctcgacgcctgcgtgcgcgtgctcgccgactggggctgggccgagcgcccggtc
gcggtcgtctcgatgccctcgcgctcgcaccccgagctcgtgcgctcgctcgccgaaggc
ctcgcgcgcatcggccggctgccctacctcggcgcactcgcccccgcgaacggcggcccg
agcggacagcccggcggcaacagcgccttccgcctggccggcgtctggcagcggttctcc
accgaagggctcgacgtgccgagcggcggggtgctgctcgtcgacgacctcgccgacagc
aagtggtcgctcaccgtcgcggcgcgcgaactgcgactggccggcgccacctcggtgctg
ccgttcgtgctcgcgctgcgcggctga
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