Acinetobacter gyllenbergii: FPL18_03785
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Entry
FPL18_03785 CDS
T08262
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
agyl
Acinetobacter gyllenbergii
Brite
KEGG Orthology (KO) [BR:
agyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agyl03009
]
FPL18_03785 (rlmD)
Enzymes [BR:
agyl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FPL18_03785 (rlmD)
Ribosome biogenesis [BR:
agyl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FPL18_03785 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
PCMT
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltr_RsmB-F
Methyltrans_SAM
Ubie_methyltran
TRAM
Methyltransf_23
Methyltransf_11
CMAS
PrmA
GCD14
Methyltransf_12
Methyltransf_15
Methyltransf_32
UPF0020
DOT1
FtsJ
Motif
Other DBs
NCBI-ProteinID:
QHH93017
LinkDB
All DBs
Position
complement(815968..817377)
Genome browser
AA seq
469 aa
AA seq
DB search
MKHKAKQRPTQYPSYTFQIEAFSHEGRGIAHYGTHPDHPKEKHGKKVFIRYALVGETVQA
KITNQTSRLEEADMVKLESEAAEGRVDPICPHFGVCGGCSLQHIHPDEQIVLKQNVLKSH
LQHFAGLQPEQWLDPIRSVKADYRRRARIGVRYIAKQNRLVMGFREHHSNHLTAIQQCKV
LDQTLSECLPELKKLLESLTGKAHIGHIELAMGDSEVALLIRHLDELNVSDVNQLRQFTL
LKGWQLYLQPKGADSLHRVDDSQAAMRLHYSLDDFAVKFAFSPLDFTQVNSGVNAQMIHL
ACELLQLQKGERVLDLFCGLGNFSLPIARCVGEAGQVVGVEASDEMVNRATENAQANHLS
QAAFFSQDLTKDFSHHSWAKQGFDALLIDPPRSGAFEVMQYVPNFGAKRIVYVSCNPSTL
ARDAGVLAQYGYQLKKAAVMDMFTHTEHVESIALFEKVERLEKIEEIND
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacacaaagcgaaacaacgtccaacgcaatatccaagctatacctttcaaatcgag
gcattttcgcatgaagggcgaggcattgcgcattatggaacgcatccagatcatcctaaa
gaaaaacacggcaagaaagtttttatccgttatgcccttgtcggcgaaacggtgcaggcc
aagattaccaatcaaacctcacgcttagaagaagcggacatggtcaagctggaaagtgag
gccgctgaggggcgagttgatccgatttgtccacattttggggtgtgtggcggctgcagt
ttgcagcatattcatcctgatgaacagattgtgttgaaacagaatgttttaaaatcacat
ttgcaacattttgcaggattacaacctgaacaatggctcgatccgattcgttcggttaaa
gctgattatcgtcgccgtgcccgaattggggtgcgctatattgccaagcaaaatcgattg
gtgatgggttttcgtgagcatcacagtaatcatttaaccgcgattcaacagtgtaaggtg
cttgatcaaaccttatccgaatgtttaccagaacttaaaaaactactcgaaagtcttaca
ggcaaagcgcatatcggtcatatagaattggcgatgggcgacagtgaggttgcattatta
attcgtcacttagatgaattaaatgtgtcggatgtcaaccaattacgtcaatttacgtta
ctcaaaggatggcagttgtatttgcagccaaaaggggcagatagcttacatcgcgtggat
gattcacaagcggcaatgcgtttgcattacagtttggatgattttgctgtcaaattcgcg
ttttcaccgttggactttactcaagtcaatagtggtgtcaatgcacagatgattcacttg
gcatgtgaattgcttcagttacagaaaggggaaagagtactggacctattctgtgggtta
ggtaatttttcactcccgattgcacgttgtgtgggtgaggcaggtcaagtggtcggcgtt
gaggcgagtgatgagatggtcaacagggcaaccgagaatgcgcaagcaaatcatttgtct
caggcggcgttcttttcacaagatttaacaaaagacttttcgcatcattcttgggcgaaa
caaggatttgatgcattattaattgatcctccacgatcaggtgcatttgaagttatgcaa
tatgtacctaattttggagcgaaaagaatcgtttatgtatcatgtaacccatcaacactg
gcaagggatgcaggtgtactggcacaatatggctatcaattgaagaaagcagcagtcatg
gacatgtttacgcatactgaacatgttgaatcgattgccctgtttgaaaaagttgagcgg
cttgaaaaaatcgaagagataaacgattaa
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