Acinetobacter gyllenbergii: FPL18_04975
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Entry
FPL18_04975 CDS
T08262
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
agyl
Acinetobacter gyllenbergii
Pathway
agyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FPL18_04975 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agyl03400
]
FPL18_04975 (recD)
Enzymes [BR:
agyl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FPL18_04975 (recD)
DNA repair and recombination proteins [BR:
agyl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FPL18_04975 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
UvrD-helicase
Helicase_RecD
AAA_22
SLFN-g3_helicase
ResIII
Herpes_Helicase
DEAD
T2SSE
nSTAND3
NPHP3_N
AAA
PhoH
PIF1
AAA_28
AAA_7
AAA_16
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QHH93238
LinkDB
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Position
complement(1072280..1074091)
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AA seq
603 aa
AA seq
DB search
MNNSVYNLVDKRVGKFEDNSVDKQVDDQSTQMTWLNMWSDYLSQAPFSQSTQSVNAAQVL
QQLVEASLQGDSCIEVEPIQLEALADLAVSSEIAVTQVAPCVYDQQGLALYRYWHLEQRL
AQQICRLKQQTIQAVDAEPYQDLLSDEHQQAALKMVLQQGLSIITGGPGTGKTYTLARII
AALNQTIPDIRIAMAAPTGKAAQRMQEALQNSFNDPKLLESGLITDELRNQTTQTLHRLL
GMGNRQIPRFHPKQPLPYDVIVVDEASMLDLNLATLLFEAVPDQCRIILLGDANQLASVD
VGSVLADLQQVQALTENRVQLQTSRRFSGEAKIGQFARFIQAQQDLSSPDLVLSKLEAEI
VQAAPLQTISLSKDMPDLIQLEYLPEQQQVDIEPYQHQLMAGFQAYIEALKHYIQADEPA
EHIQKVIQAFDDYRILTAVRHGPLGIEQLNRYAGHWLNQQLKQIAVGDWYIGRPVMMTYN
DYQLGISNGDIGICFKHRTQSQQFEVFFPSLNKWIAAHRLPRSMQTAFALTIHKSQGSEF
THTAIVLDAHAEKLLSQELIYTAVTRAKKVVSILADSKALQQALTIRTVRRSGLVQKINL
NRL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgaataactctgtttataaccttgtggacaagcgtgtgggtaagtttgaggataactct
gtggacaaacaagttgatgatcagtcaacacaaatgacatggttaaatatgtggagcgac
tatctctcacaagcaccattttctcaatctactcaatcagttaacgctgcacaggtacta
caacaactggttgaagctagtttacaaggcgacagttgtattgaggttgagccaatacag
cttgaagcactggctgatttagcagtttctagtgaaattgcagtgacgcaagtcgcgccg
tgtgtctatgatcagcagggcttggcattataccgatattggcatctagagcaacgcctc
gcacagcagatttgtcgattaaagcaacaaacgattcaggctgttgatgctgaaccttat
caggatttactcagtgatgaacatcagcaggctgcactaaaaatggtgctgcaacaaggt
ctgagcattattaccggtggaccggggacaggtaaaacctataccttggcacgtattatt
gcagccctcaaccaaaccattcccgatattcgtattgccatggcggcaccgacaggtaaa
gccgcgcaacgcatgcaggaagcattacagaactcattcaatgatccaaaattattggaa
tcaggtttaattacagatgagttgcgtaatcaaaccacgcagaccttgcaccgtttactg
ggcatgggcaatcgacaaataccacgctttcatcccaaacagcctttgccttatgacgtg
attgtggtcgatgaggcctcaatgctggatttaaatttggcaaccctgttattcgaggca
gtcccagatcaatgtcgaattattttgctcggtgatgccaatcaattggcttcggttgat
gtcggctcggttttggctgatttacagcaagtacaggcattgactgaaaatcgagtccag
ctacagaccagccgtcgtttctctggtgaagccaagattggacaattcgcacgatttatt
caggcgcagcaagatctcagcagccctgatttagtcttatcaaaactagaggcggaaatt
gttcaggccgcacctttgcaaacgatttccttgagcaaggatatgcctgacctgatccag
ttggaatatctacccgagcaacaacaggttgatattgaaccctaccaacatcagttaatg
gctggatttcaagcctatatcgaggctttaaaacattatatacaggcagatgaacctgcc
gagcacatccagaaggtgattcaagcctttgatgattatcgaatcttaacagcagttcgg
catgggccattgggaattgagcaactgaatcgttatgccgggcattggctcaatcagcaa
ctcaaacaaattgctgttggagactggtatatcgggcgtcctgtaatgatgacctataat
gactatcagcttggaatttctaatggtgatatcgggatctgttttaaacatcgcacccag
tcacagcaattcgaagtctttttcccgagcttaaataaatggattgcagcgcatcgactg
ccacgcagtatgcaaaccgcctttgctttaaccattcataaatcacaaggttcggaattt
acccataccgcgattgttttagatgcgcatgccgagaagctgttgagtcaggaattgatc
tataccgcagtcacccgtgctaaaaaagtggtgagtattttggctgattcaaaggctttg
cagcaggcattgacgatacgcactgttcgacgcagtggtttagtgcaaaagatcaatttg
aacagattgtga
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