Acinetobacter gyllenbergii: FPL18_16125
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Entry
FPL18_16125 CDS
T08262
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
agyl
Acinetobacter gyllenbergii
Brite
KEGG Orthology (KO) [BR:
agyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agyl03016
]
FPL18_16125
Enzymes [BR:
agyl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FPL18_16125
Transfer RNA biogenesis [BR:
agyl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FPL18_16125
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
QHH95245
LinkDB
All DBs
Position
3449250..3450392
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AA seq
380 aa
AA seq
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MFQFIQQQQDLAVLLKQMEQCSVYALDTEFIKVDTLYPKLGVCQINLNGQILLLDGAALD
LSNFWPKIFAAQQNIFHACGEDIDLIYHYADQKPLNNVFDTQVALAFLGHGLQVSYQNAL
KTCLNIEIEKDQTRSDWLARPLSQEQMCYAANDVIYLSKLADALKTDLKAKGLYQYVLED
CQNLTKEIAMETPLAELYTDIGNYRHSRRELMQLQQLSIWREQITKALNQPRSFILRNST
MIDLVEKNPRNNFQLARIKDIRPHIVREHGKTILDLLKFLPPEEEWPLRMAKPIKSNSKE
VAPKIDALIESVVLQTGIPKEVLLRKKWMNAIYEHVVFHLDEQSLPSYLMGWRYDILTQP
LIILLREDIQYLATQMKVAR
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagtttatccaacagcaacaagatttagctgttctcctcaagcagatggaacag
tgttctgtctacgcccttgataccgagtttattaaggtcgataccttatatcctaaactt
ggtgtttgccaaatcaatttgaatggtcagattctgttgcttgatggcgcagcattagat
ctcagcaatttttggccgaagattttcgcggctcaacaaaatatttttcatgcctgtggt
gaagatattgatctgatttatcattatgcagatcaaaaaccattaaataatgtattcgat
acgcaagttgcgttggcatttctcgggcatggccttcaagtcagttatcaaaatgcactg
aagacctgtttaaatattgagattgaaaaagatcagactcgttcagactggcttgctcgg
ccattgagccaagagcagatgtgctatgcagcaaatgatgtgatctatttaagtaaactt
gcagatgcactgaaaacagatctgaaagcaaaagggctgtatcaatacgtattggaagat
tgtcaaaatctcaccaaagaaattgcgatggaaacaccattagcggaattgtataccgat
atcggtaattatcgacattcgcgccgtgagctgatgcagttgcaacaacttagcatttgg
cgagaacagattaccaaggcactgaatcagccacgtagctttattcttagaaactctact
atgattgatttggtggaaaagaatccgcgcaataattttcagttggcgcgcattaaagat
attcgtccgcatattgtacgcgaacatggcaagactattttggatttactcaagttctta
ccgccagaggaagaatggccattacgtatggcgaaaccaatcaagagtaattccaaagaa
gttgcacctaaaattgatgcgttgattgaaagtgtggttttacaaactggtattccgaaa
gaagtgttattgcgtaagaaatggatgaatgcgatctatgaacatgtggtattccattta
gatgagcagtccttaccgagttatttaatgggttggcgctatgacattctgacacagccc
ctgattattctattaagggaagacattcagtatctagccacacaaatgaaagttgcacga
taa
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