Agarivorans sp. TSD2052: M0C34_00020
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Entry
M0C34_00020 CDS
T08089
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
agz
Agarivorans sp. TSD2052
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agz03032
]
M0C34_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
agz03400
]
M0C34_00020 (gyrB)
Enzymes [BR:
agz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
M0C34_00020 (gyrB)
DNA replication proteins [BR:
agz03032
]
Prokaryotic type
DNA Topoisomerases
M0C34_00020 (gyrB)
DNA repair and recombination proteins [BR:
agz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M0C34_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UPW18699
LinkDB
All DBs
Position
3619..6036
Genome browser
AA seq
805 aa
AA seq
DB search
MAENEYGSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCQDV
VVTIHNDGSVSVSDDGRGIPVDMHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSIKLQLTVKRQGHVYEQFYTLGEPDAPLAVVGDTDKTGTELRFWPSNEIFSDT
KFHYDILAKRLRELSFLNSGVSIILKDERDDKQDHFMYEGGIEAFVSYLNTNKTPIHPKA
FSFNFQRDDGIAVELAMQWNDGFQENVYCFTNNIPQKDGGTHLAGFRAALTRTLNSYMEK
EGVNKKDKNNATGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQTMGEKLSE
YLLEHPSEAKIITQKILDAARAREAARKARDMTRRKGALDLAGLPGKLADCQEKDPALSE
LYIVEGDSAGGSAKQARNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITAMGCGIG
RDEYNPDKTRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGYIYIAQPPLYKVKK
GKQERYVKDEESLTEYLTSLALDNAGLYVNAEAPAISGEQLEGLVTQYRRVWKNNERLSR
RYPISLLSQMVYQRPLNVEELKQAEVLEQWAEELIGPVNAELPSGNYYSVEIEKHEEREI
YYPVVTLRQHGVDVSFKFEPEFFASHDYQDICSLFAKLNNLVEEGAYIKRGEKTKPVKGF
EEALNWLMAESRRGLYIQRYKGLGEMNPDQLWETTMDPETRRMLQVTVEDAIACDQLFTT
LMGDQVEPRRNFIEENALNVENLDV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaatgaatatggctcatcgagtattaaggtcctaaaaggtcttgatgcagta
agaaaacgtcctggaatgtacattggtgacaccgacgatggttcaggtttacaccacatg
gtattcgaagtcgtagataactctatcgatgaagcattagctggacactgtcaggatgta
gtagtaaccattcataatgacggttcggtgtcagtatccgatgatgggcgtggtatccct
gttgatatgcatgaagaagagggggtttcagcagcagaagttattatgactgtactgcac
gcaggcggtaagtttgatgataactcttataaggtatctggtggtttgcacggtgtaggt
gtttcggtggtgaatgcactatcgataaaactacagcttactgttaagcgccaagggcat
gtttacgagcagttttataccctaggtgaacctgatgcgccactcgctgttgtgggcgat
accgataagaccggtaccgagctacgcttctggccaagtaatgaaatattttctgatact
aagtttcactacgatattttagccaagcgcttacgtgaactttcgttccttaactctggt
gtatcgatcatcctaaaagatgagcgcgatgataagcaggaccacttcatgtatgaaggt
ggtatcgaagcgtttgtctcttacttaaacaccaacaagacaccgattcacccaaaagca
tttagctttaacttccagcgtgatgacggtattgctgtagaactagcaatgcaatggaac
gatggcttccaagaaaacgtatattgttttactaacaacattcctcagaaagacggtgga
actcacttagcgggttttagagcggcgctaacccgtactcttaatagctatatggagaag
gaaggcgttaataaaaaagacaagaacaatgctaccggtgatgatgctcgtgaaggttta
accgccgttgtttcagttaaagtgcctgatcctaagttctctagccaaactaaagacaag
ctcgtgtcctctgaagttaagtctgcggttgaacaaaccatgggtgaaaaacttagcgag
tacttactagagcatccttcagaagctaaaatcattacgcagaaaattttggatgctgcg
cgtgcgcgtgaagccgcacgtaaagctcgcgacatgactcgccgtaaaggtgcgctagat
ttagctggcttaccaggtaagttagccgattgtcaggaaaaagaccccgccctttctgaa
ctatacatagtggaaggagactcggcgggtggcagtgctaaacaagcgcgtaaccgcaaa
aaccaagctattttaccattgaagggtaaaattcttaacgtagagaaagcgcgtttcgac
aagatgctatcttcgcaagaagttgccaccctaattactgctatgggttgtggcattggt
cgcgatgaatataacccagacaaaacccgttatcacaacatcattatcatgaccgatgct
gatgtggatggctcgcacattcgtactctattgctgacttttttctaccgtcaaatgcct
gagattattgaacgtggttatatctacatcgcccagcctcctttatataaagtgaaaaag
ggtaagcaagagcgttatgtaaaagatgaagagtcgttgactgaatacctaacaagctta
gccttagataatgctggcctttatgtaaatgctgaagcgcctgcaattagcggtgaacag
ttggaaggattagtgactcaataccgtcgagtgtggaaaaacaacgagcgtttgtctcgc
cgttaccccatctctttgctgagccaaatggtttatcaacgcccacttaatgtggaagag
ttgaagcaagcagaggtactagagcaatgggccgaagaactaatcgggccggtgaatgct
gaactaccaagtggtaactactattcagtagaaatagaaaaacacgaagaacgtgaaatt
tactacccggtagtaacgcttcgccaacatggtgtggatgtgtcatttaagtttgagcca
gagttcttcgcttcacatgattaccaagatatctgtagtctgtttgcaaaactaaataat
ttagttgaagaaggggcttacattaaacgtggtgaaaaaaccaagccagtaaaaggattt
gaagaagcccttaactggttgatggctgagtcgcgtcgaggtttgtatatccaacgttac
aaaggactgggtgagatgaaccctgaccaactttgggaaacgaccatggaccctgaaact
cgtcgtatgttgcaagtgacagtagaagatgcgattgcttgtgaccagctatttactacc
ttgatgggtgaccaagttgagccgcgccgaaacttcattgaagaaaatgcgctaaacgtt
gagaaccttgacgtgtag
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