Agarivorans sp. TSD2052: M0C34_00095
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Entry
M0C34_00095 CDS
T08089
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz00071
Fatty acid degradation
agz00280
Valine, leucine and isoleucine degradation
agz00310
Lysine degradation
agz00362
Benzoate degradation
agz00380
Tryptophan metabolism
agz00410
beta-Alanine metabolism
agz00640
Propanoate metabolism
agz00650
Butanoate metabolism
agz00907
Pinene, camphor and geraniol degradation
agz00930
Caprolactam degradation
agz01100
Metabolic pathways
agz01110
Biosynthesis of secondary metabolites
agz01120
Microbial metabolism in diverse environments
agz01200
Carbon metabolism
agz01212
Fatty acid metabolism
Module
agz_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
M0C34_00095 (fadB)
00650 Butanoate metabolism
M0C34_00095 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
M0C34_00095 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
M0C34_00095 (fadB)
00310 Lysine degradation
M0C34_00095 (fadB)
00380 Tryptophan metabolism
M0C34_00095 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
M0C34_00095 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
M0C34_00095 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
M0C34_00095 (fadB)
00930 Caprolactam degradation
M0C34_00095 (fadB)
Enzymes [BR:
agz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
M0C34_00095 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
M0C34_00095 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
M0C34_00095 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
M0C34_00095 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
SDH_protease
RbsD_FucU
Motif
Other DBs
NCBI-ProteinID:
UPW18714
LinkDB
All DBs
Position
complement(22047..24206)
Genome browser
AA seq
719 aa
AA seq
DB search
MIYQGENLSVRYIADGIAELTFDAKQGSVNKLDKSTLVSLDEAITALQQQANLTGLLVSS
AKDAFIVGADITEFLGLFALPEEQLAAWLTKANDIFNALEDLAVPTISAVNGYALGGGCE
FILSTDLRVAEPNARIGLPETQLGIMPGFGGTVRLPRVIGADNAMEWITTGKNYKAGEAQ
KFAMLDAVVPAEQLHAAALTMLQDAIAGKIDWQSRRQAKLSPLALNKIEATMSFNCAKGM
VMAKAGPHYPAPITAVKTMEKAAHLGRSEALALEGKYFIGLAKSEVAQALVGIFLNDQQL
KGLAKKASKNAQNIAQAAVLGAGIMGGGIAYQSASRGVPAVMKDINQAALDLGMNEASKL
LNKQLERGRIDGLKMAKILSAITPSLNYQAIANSSIVVEAVVENPKIKAAVLQEVEQHVD
DNTIIASNTSTIPISLLAKNLARPEKFCGMHFFNPVHRMPLVEVIRGEHTSQDTIDSVVA
YAAKMGKTPVVVNDCPGFFVNRVLFPYFFGFTRLLQDGADFVNVDKIMEKQFGWPMGPAY
LLDVVGIDTGHHAGAVMAEGFPERMAKNGEDAIDVMYQAERFGQKNGLGFYAYTKDRRGK
PKKDADPASYQLLANIAGEKCDYSSEQIIARMMIPMINEVVRCLEEGIIQSPAEADMALV
YGLGFPPFRGGVFRYLDTMGLDKYVALADQYAELGPLYQVTDGLRAKAAAGETFYGKQG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatatatcaaggcgagaacctcagtgttcgttatattgccgacggtatcgctgaacta
acattcgatgccaagcaaggaagtgttaataaattagacaaaagcactttagtctcgttg
gatgaggccattaccgcattgcaacagcaagcaaatttaaccggcttgctggtaagttca
gcgaaagacgccttcattgttggagccgatatcaccgagtttctcggcttattcgcccta
ccagaagaacaactggcggcatggttgactaaagccaatgatatttttaatgctttagag
gacttagctgttccgacaatttcagcggttaacggttatgcacttggcggcggttgtgaa
ttcattctgtctaccgacttacgggtcgccgaacccaatgctcgcattggcctaccagaa
actcaattaggcatcatgcctggctttggcggcacagttcgcttaccacgagtgattggt
gccgataacgctatggagtggattaccacaggcaaaaactataaagctggcgaggctcaa
aagtttgccatgcttgacgccgttgtgcctgccgaacagctacatgctgccgcattaacg
atgttgcaagacgccatagcgggcaaaattgactggcagagccgtcgccaagctaagctg
tcaccattagctttaaacaagatcgaagcaaccatgagttttaactgtgcaaaaggcatg
gttatggcgaaagcagggccacactacccggcaccgattaccgcggtaaaaaccatggag
aaggcggcccacttaggccgtagcgaagcattagccctagaaggtaaatacttcattggt
ttagccaaatcagaggtcgctcaagccttggtcggtatattcttaaacgaccaacaacta
aaaggcttagcgaaaaaagcctcgaagaacgctcagaacatagctcaagcggcagtgtta
ggcgctggtattatgggtggcggtatcgcctatcaaagtgccagtcgtggtgtacctgcg
gtgatgaaagacattaatcaagcagcgctagacttaggcatgaacgaagctagcaagcta
ttaaacaagcagcttgagcgcggccgtatcgatggtttgaaaatggctaaaatcctgtcg
gccattacccctagcctaaactatcaagccattgctaacagcagtattgtggtagaagcg
gtggttgaaaatcccaaaatcaaagccgctgtactgcaagaagttgagcagcatgttgat
gacaacaccattattgcttcaaatacctcgactattcctatttctttactggcgaagaat
cttgcccgcccagaaaaattctgtggcatgcactttttcaatcctgtacaccgcatgcct
ttagttgaagtgattcgtggtgagcatacctctcaagacactatcgatagcgtggtcgcc
tacgccgccaaaatgggcaaaaccccggtagtcgtcaatgactgccccggtttctttgtt
aaccgcgtattgttcccttacttctttggctttactcgcttactgcaagacggtgccgac
ttcgtcaacgttgacaagatcatggagaaacaatttggttggccaatgggtccagcttac
ttacttgatgtagtgggtattgataccggccaccacgccggtgcagtcatggctgaaggt
tttccagaaagaatggccaaaaacggtgaagatgctatcgatgttatgtaccaagcagaa
cgctttggccagaaaaatggtctaggtttctacgcctacaccaaagaccgccgcggtaaa
ccgaaaaaagatgccgaccctgctagctatcaactgttagctaacatcgctggcgaaaaa
tgtgattacagcagcgaacaaatcattgcccgtatgatgattccaatgattaatgaagtg
gtccgttgtttagaagaaggtattattcaaagccctgccgaagctgatatggcgctggtt
tatggtttgggtttccctcctttccgcggcggtgtattccgctacctagataccatgggt
cttgataagtatgtcgcgctagccgatcaatatgctgaactcggtccactctaccaagtg
accgacggcctgcgagctaaagcagcggctggtgaaactttttatggtaagcaaggctaa
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