Agarivorans sediminis: M0C34_01115
Help
Entry
M0C34_01115 CDS
T08089
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
agz
Agarivorans sediminis
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agz03009
]
M0C34_01115 (rsmB)
Enzymes [BR:
agz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
M0C34_01115 (rsmB)
Ribosome biogenesis [BR:
agz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
M0C34_01115 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_31
FtsJ
Methyltransf_25
Methyltransf_37
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
UPW18906
LinkDB
All DBs
Position
complement(226911..228233)
Genome browser
AA seq
440 aa
AA seq
DB search
MAEQPKTKQINARAAAANILYQVVDQGQSLSQMLPRVLPQVVPRDHALVKELCFGVLRWL
PRFEAVLQQLMDKPLKGKIRNGHFLLMVGLYQLFYMRVPAHAAVSETVSATSQLKLHSLK
KLVNGVLRNAERQREQLEPQLTANDGLQYCHPSWITKRIKAAYPQHWRDILDANNQHAPM
WIRVNALQGQRDSYQAQLSELEIASQASNIALQALCLEKAQAVHKLPNFAEGAASVQDGA
AQMAASLLDAQAGERVLDACAAPGGKTCHILELQPQLSELVAVDTEQTRLNRVTENLDRI
GLKATLHCADASKPEQWNTQPFDRILLDAPCSATGVIRRHPDIKWLRRESDIAELVKLQK
EILSALWHQLKPGGTLLYATCSVLPDENSQQIAAFLQQTDDAELIAINPDETPEQPGWQL
LPGDNNMDGFYYARLRKSVS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacagccaaaaactaaacaaattaacgcccgagccgccgccgcaaatatattg
tatcaagtggtcgatcagggccaatctctcagccaaatgttacctagggtattaccccaa
gtagtaccgcgcgaccatgccctggtaaaagaactgtgtttcggtgtgctgcgttggtta
ccgcgttttgaagcggtactgcaacagctaatggataagccactgaaaggcaaaatccgc
aacggccatttcctactaatggtggggctataccaactgttctatatgcgagtacctgct
catgcggcagtatcagaaaccgtgtcagccaccagccaattaaagctgcatagcttaaaa
aagctggtcaatggggtactgagaaacgctgagcgccagcgcgagcaactagagccacaa
ctcaccgccaatgacggtttgcaatattgtcacccaagctggataactaaacgcatcaaa
gccgcttatccgcagcattggcgcgacattttagatgctaacaaccaacatgcgccaatg
tggataagggtcaatgccttgcaaggtcagcgcgatagctaccaagcgcaactcagtgag
ctagaaatagccagccaagcttctaacatcgctctacaagcgctatgtttagaaaaggct
caagctgtacataaactgcctaactttgcagaaggggcagcctcagtgcaagacggcgcc
gcgcaaatggctgcaagtttgttagacgctcaagccggtgaacgggtattggatgcctgc
gccgcacctggcggaaaaacctgccatattcttgagctgcaaccacaactgtctgagcta
gtggcggtagatactgagcaaacgcggttaaatagagtaactgaaaacttagacagaatc
ggtctcaaagctaccttgcattgcgccgacgccagcaaaccagagcaatggaatacccag
ccctttgaccggatattgttagatgcgccatgttcagccaccggcgttattcgtcgtcac
cccgacattaaatggctgcgtcgagaatcagatattgcagagcttgtgaaactgcaaaaa
gagattcttagcgccctgtggcatcaactcaaaccgggtggaacactgttatacgcaacg
tgttcggtattaccagatgaaaatagccagcaaatcgcggcttttttgcaacaaacagac
gatgccgagctaatagccattaaccctgatgaaacgccagagcaacctggatggcaactt
ttgcccggtgacaataacatggacggcttttattatgcgcgtctgcgcaaaagtgttagt
tga
DBGET
integrated database retrieval system
