Agarivorans sp. TSD2052: M0C34_01810
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Entry
M0C34_01810 CDS
T08089
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M0C34_01810 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agz03400
]
M0C34_01810 (recC)
Enzymes [BR:
agz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M0C34_01810 (recC)
DNA repair and recombination proteins [BR:
agz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M0C34_01810 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UPW19038
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All DBs
Position
386119..389520
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AA seq
1133 aa
AA seq
DB search
MLYLYQSNHLDTLQLLLSKVMALQAPANPFTQQQILVQSPGMAQWLKLQLAEQQGIVANV
AFPLPASFIWQMFHLVLQDVPEQSPFNKEAMSWRLMRLLPQRLSEVEFSPLRHYLLGDDD
TASFEGRKLWQLAQKVADIYDQYLVYRSEWTSAWEGGDDLIEVSGSQPWQPILWRDLVDD
TVGAMDSPYHRGNMYIDFVEQLRLSKTAPEGLPEQVFIFGISALPPAYVEALDALALHTN
IHLFLTNPSEQYWGDVRDVTTVLKQQSEIERVGNPLLASMGKLGRDYIEMLHPLNKQETD
LFFDNYVKPQHDEPPVAPALLALIQDDILKLQDPIDYQQFDSSEHKRLIQPSDNSIQLHL
CHSPRRELEVLHDQLLAMFEQDPELSPRDIIVMVPDVNRYGPMIQAVFGSASAETRLPFA
ISDRSATQENPVLLSFLELLALPQKRKSAAELLALLEVPAIMRRFELSDDELKPLRQWVK
EAGVRWGLDGSDRSRWQAPEDETHSWLFGLKRMLLGYAMPSEAGLYQGVLAYDEVQGKRA
LAVGKLADFIDLLIQLEQDLLIAVPAEQWQLRLQDLVQHIYRFDADDEAEYLRLLKLFET
LAEQCAASDYKDDIGPELILDYCRNQLNAQRGSQRFLAGQINFCTLLPMRAIPFKVVCLL
GMNDSEYPRSVPSLGFDLMADNPPKRGDRSRRDDDRYLFLEALLAAQQRLYISYIAHSAK
DNSEQTPSVLVAELCDYIGQSCALVGDEKLNVDQSGVKLLAQVTCKHPLQPFSPEYYQSA
SASGSLTGEPLKIFSYAQRWLPAVTAQQQVKPSVPELSQLINEGGLTDLTMDELLAFSRS
PIAYFYQRRLKVSFPRLTEQLEETEPFVVDGLSGYSMKLHLLEQQLNNADKQQQFAYLHA
AGALPHGGFAEVSFEQQWQEMQPLADTLFPLLAGGVLEHQQLVVDVNYNAEDSELSSRLS
AWLKQRYAQGLVSYRPGSIRGKDLVAAWLWHLVFHAAQPSQASSSYIIGRKHAWQFTPVA
AEQALQCLGEWLTCLHAGLQQPLLLPIESAWQWISQCKDKKTGAIAFSEANIDKARRAAR
TQFVGGPFAQAEGDDPYIQAQLADLEAIWPEFEANTQRLLEPLLSHLEEFAHV
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
ttgttatatctatatcaaagcaaccacttagacactctgcaattattgttaagcaaagtg
atggccttacaggcacctgctaacccatttactcagcaacaaatcttggtgcaaagcccc
ggcatggcgcagtggttaaaactgcagctcgcagagcaacaaggtattgtggctaatgtg
gcttttccgctacccgccagctttatttggcaaatgtttcatttggtattgcaagacgta
cccgagcaaagcccgtttaacaaagaagcgatgagctggcgcttaatgcgtttgctaccg
caacgccttagcgaggttgagttttcgccacttcgccattatttgctcggtgacgacgac
acggcatcatttgaaggccgcaagctatggcaacttgcccaaaaggtagcggatatttac
gaccaatatttggtgtatcgcagtgagtggaccagcgcttgggaaggtggcgatgattta
atcgaggtgagtgggagccagccatggcagccgatattatggcgcgatttggtcgatgac
actgtgggggctatggactcaccctaccaccgcggcaatatgtatatcgattttgttgag
cagttgcgtttaagcaaaactgctccagaagggctaccggaacaggtgtttatctttggt
atttcggcgctgccgcctgcctatgttgaggctttagacgccttagctttgcatactaac
atccatctatttttaactaatccctctgaacaatactggggcgatgtacgcgatgtgact
acagtgctaaagcaacagtctgagattgaacgagtaggtaaccccttactggcttcaatg
ggtaagctggggcgtgattatatcgaaatgctgcaccctctaaataagcaagaaactgac
ctcttttttgataattacgtcaagcctcaacacgatgagccgcctgtcgcgcctgctcta
ttggcgctcattcaagacgatattttgaaactgcaagatcccattgattatcaacagttt
gacagtagtgaacataaacggcttattcagcccagtgataacagcatacagctgcacctt
tgtcacagcccacgccgagagcttgaagtattgcatgaccagttactggcgatgtttgag
caagacccagaattaagcccgcgtgacattattgtgatggtgccggatgtcaaccgttat
gggccaatgattcaagcggtgtttggcagtgctagcgcagaaacccgtttgccgtttgcg
atttcagataggagtgccacccaagaaaatcccgtgctattaagctttttggaattgctc
gccttaccgcaaaagcgtaagtctgcagccgaattgctggccctattagaagtgccagcg
attatgcgtcgttttgaactgagtgatgatgagttaaaacccttgcgccaatgggtaaaa
gaagcgggggtgcgttggggcttagatggtagtgatcgcagccgctggcaagctcccgaa
gatgagacccactcttggttatttggcctaaagcggatgttgttaggttacgctatgccc
agtgaagcgggtttgtatcaaggtgtgttggcttacgatgaggtgcaaggcaagcgcgct
ttagccgtgggtaaattggcagattttatcgatctgttaatccaacttgagcaggactta
ttaatcgcggttcctgctgaacaatggcaattgcgcttacaggacttagttcagcatatt
tatcgttttgatgctgacgatgaagctgaatatctacgtttattgaagctgtttgaaaca
ctagcggagcaatgtgcggcaagtgattataaagacgatattggcccagaattaattctc
gattattgccgtaatcaacttaacgcacagcgcggaagtcaacgttttctagccggccaa
attaacttttgtaccctgctgccaatgcgtgcgattccttttaaagtcgtgtgtttactg
ggcatgaatgacagcgagtatccgcgtagtgtgcccagcttaggttttgatttaatggcg
gataacccgccaaagcgcggtgaccgtagccgccgagacgacgaccgctatttattctta
gaagcgctgttagcggcacagcaacgtttatatatttcctatattgcgcatagtgctaaa
gacaatagcgaacaaaccccttcggtactggtggctgagctgtgtgactatattggtcaa
agctgtgccttagtgggagatgaaaagctgaatgtggatcaatctggcgttaagctgtta
gcacaggtgacatgcaagcatcccttgcaaccattttcgcccgaatattaccaaagcgca
tcagccagcggttcgttgactggggagccgcttaagatttttagttatgcgcagcgttgg
ttgcccgcggtaacagcgcagcagcaagttaaaccttcggtccctgaattatcgcaactg
atcaatgagggaggcttgactgatctaacaatggatgaactgctggcttttagtcgctcg
ccgattgcctatttttatcagcgtcgcttaaaggtgagctttcctcgtttaaccgagcag
ttagaagaaaccgaaccctttgtcgtagacggcttgtctggctatagcatgaagttgcat
ctattagagcagcaattaaataatgctgataagcaacagcagtttgcttatttacacgca
gcgggagccttacctcatggtggttttgcagaggtctcttttgagcaacaatggcaagag
atgcaacctttggcagataccttattccccttactggctggcggcgtattagaacatcaa
cagctcgttgttgatgttaattacaacgctgaagatagcgagctatcaagccgcttatcg
gcttggttaaagcagcgctacgctcaagggttagtgagttatcgccctggtagtattcga
ggtaaggatttagtcgctgcgtggttatggcacttggtctttcatgccgctcaacctagt
caagctagcagcagctatattattggccgcaaacacgcttggcaatttacgccagtagcg
gctgagcaggccttgcaatgcctaggcgagtggttgacttgtttgcatgcgggtttacaa
cagccactgctattgccgattgaaagcgcctggcaatggattagccaatgcaaagataaa
aagaccggtgcgatagcatttagcgaagccaatatcgacaaggcgcgccgcgctgctcgc
acccagtttgtgggggggccgtttgcgcaagccgaaggtgatgacccttatattcaagcc
cagttagccgatttagaagcaatatggccggagttcgaagccaatactcagcgtttactc
gaaccgctactgtcacatttagaggagtttgctcatgtctga
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