Agarivorans sp. TSD2052: M0C34_01990
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Entry
M0C34_01990 CDS
T08089
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
agz
Agarivorans sp. TSD2052
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agz03021
]
M0C34_01990 (rpoH)
Transcription machinery [BR:
agz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M0C34_01990 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
HTH_25
VpsR
Motif
Other DBs
NCBI-ProteinID:
UPW19073
LinkDB
All DBs
Position
429156..430004
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AA seq
282 aa
AA seq
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MDQKIASMALVPQGSIEAYIQSVNRIEMLSAEKEKALATRLFEDGDLSAARELVMSHLRF
VAHVAKNYAGYGLPQADLIQEGNVGLMKAVKRFDPSVGVRLVSFAVHWIKAEIHEYVLRN
WRMVKIATTKAQRKLFFNLRKSKKRLGWFNNDEVNMVAENLGVTPKDVLEMESRMSAQDQ
AFDLASDDDEREGSFAPIQYLEDKSSDVAQFVEKENWEVAAANRLRAALNTLDERNAHIV
QRRWLDEDKATLQELADQYQVSAERIRQLEKNAMKKLKAAME
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaagatcgcatctatggcgctagtcccgcaagggagtattgaggcctatatt
caatcggttaatcgaattgagatgctaagtgctgaaaaagaaaaagcactggcgacacgt
ttgttcgaggacggtgacttaagtgctgcccgcgagctcgttatgtcgcaccttcggttt
gttgctcacgtagcaaaaaattatgcgggttatggtttacctcaagccgatttgattcaa
gagggcaacgtaggcttaatgaaagccgtaaaacgatttgacccaagtgttggtgttcgt
ttggtatcttttgctgtgcattggattaaagcggagatacacgagtatgtattacgtaac
tggcgtatggttaagattgcaaccactaaagcgcagcgtaaattattctttaacctacgt
aagtctaaaaaacgcttgggttggtttaataacgatgaagtaaatatggttgctgagaat
ctaggtgttacccctaaagatgtcttagaaatggaatctcgcatgagtgcccaagaccaa
gcctttgatctcgcgtctgacgatgatgaacgcgaaggcagctttgcgccaattcaatac
cttgaagataaatcttcagatgttgctcagtttgttgaaaaagaaaactgggaagtggcg
gcggctaatcgcctacgtgcagccttgaacacattggatgagcgtaatgcacacattgtt
cagcgtcgttggttagacgaagataaggccacattgcaagagttggcagaccaatatcag
gtctccgctgagcgaatcaggcagttggaaaaaaatgccatgaaaaagctcaaagcagcc
atggaataa
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