Agarivorans sediminis: M0C34_02605
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Entry
M0C34_02605 CDS
T08089
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
agz
Agarivorans sediminis
Pathway
agz03030
DNA replication
agz03430
Mismatch repair
agz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M0C34_02605 (ssb)
03430 Mismatch repair
M0C34_02605 (ssb)
03440 Homologous recombination
M0C34_02605 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agz03032
]
M0C34_02605 (ssb)
03400 DNA repair and recombination proteins [BR:
agz03400
]
M0C34_02605 (ssb)
03029 Mitochondrial biogenesis [BR:
agz03029
]
M0C34_02605 (ssb)
DNA replication proteins [BR:
agz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M0C34_02605 (ssb)
DNA repair and recombination proteins [BR:
agz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
M0C34_02605 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
M0C34_02605 (ssb)
Mitochondrial biogenesis [BR:
agz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
M0C34_02605 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Pro-rich
SSB_1
tRNA_anti-codon
DUF3127
Motif
Other DBs
NCBI-ProteinID:
UPW19182
LinkDB
All DBs
Position
555538..556161
Genome browser
AA seq
207 aa
AA seq
DB search
MATRGINKVILVGNLGQDPEVRFMPNGGAVANITIATSESWRDKQSGEQKERTEWHRVVL
FGKLAEVAGEYLKKGSQVYIEGQLQTRKWQDQSGQDRFSTEVVVQGFNGVMQMLGGRPGG
GASQQQGNWGGQQAAAPSAPAQQGGFQQQAAPQQQGGFQQAPQQAAPQQGGYQQQAKPAA
APQQAPAPQAAPQFNEPPMDFDDDIPF
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggccactcggggcattaataaagtaattttggttggaaatttaggacaggatcctgaa
gtccgttttatgccaaacggaggggccgtcgccaacattaccattgctacttcagaaagt
tggagagataagcaaagcggcgaacaaaaagagcggacagaatggcaccgtgtggtgttg
ttcggcaaattggctgaagtggctggtgaataccttaaaaagggttctcaggtatatatt
gaaggtcaattacaaacacgtaagtggcaagatcaaagtggtcaagaccgtttctctacg
gaagtggttgtgcagggctttaatggtgttatgcaaatgttgggtggtcgtcctggtggc
ggtgcatcacagcaacaaggtaattggggtgggcaacaagctgctgctcctagtgcgccg
gcgcaacaaggtggcttccagcaacaggctgcgccacaacagcaaggtggcttccagcaa
gcaccgcaacaggcggctccccagcaaggtggctatcagcaacaagctaagcctgctgct
gcacctcagcaagcgccagcaccacaagcagctcctcagtttaatgagccgccaatggat
tttgatgacgacattccgttctag
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