KEGG   Agarivorans sp. TSD2052: M0C34_02785
Entry
M0C34_02785       CDS       T08089                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
agz  Agarivorans sp. TSD2052
Pathway
agz02020  Two-component system
Brite
KEGG Orthology (KO) [BR:agz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    M0C34_02785
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:agz02022]
    M0C34_02785
Two-component system [BR:agz02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   M0C34_02785
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase AAA_2 AAA FleQ AAA_3 DFF-C HTH_50 AAA_16 Herpes_BLRF2
Other DBs
NCBI-ProteinID: UPW20674
LinkDB
Position
complement(598846..600189)
AA seq 447 aa
MVKAPVIIIDDDPDILRSLGQTLELEDYTCLAFDNAEQALAQLKVNWPGVIISDINMPGL
GGLEMMQQAHQIDADLPIILLTGHGDISMAIKAIRDGAYDFLEKPFSTSHLLDVLQRALD
KRRLTIENRELKAELDAQSGPGPRILGSTPAVARLRKILSHIKDTPADVLINGETGTGKE
LVARFLHDHSVRAKHPFVAINCGAVPETMIESELFGHEVGAFTGAQKKRVGKIAFANNGT
LFLDEIESMPMALQIKLLRVLEERSVEPLGSNQVIPLNLRVIAATKSDLKHLGEQGEFRS
DLYYRLNVVEVYIPALRERCEDIPLLLENFLRVAAARYQLNSPEISQQRLSELVQHNWPG
NVRELRNLAERWVLMGEDAAFNEAQNDQQSLNLAEQLFRFERTLLQDALHRHKGHLKAVQ
EELHIGRKTLYEKMKKYQLDKGDYKNH
NT seq 1344 nt   +upstreamnt  +downstreamnt
atagtgaaagcacccgtaatcatcattgacgatgatccagacatccttcgatcgctaggc
caaacactcgagttagaagattatacctgtttagcctttgacaatgccgaacaagcctta
gcgcaactcaaggtgaattggccaggagtcatcatttcagacattaatatgcccggttta
ggtggcttagaaatgatgcagcaagctcaccaaattgacgccgacttaccgatcatctta
ctgaccggtcatggggacatttcaatggcgattaaagcgatacgtgatggcgcttatgac
tttctggagaaaccgttctctactagccacttgttagatgtattgcaacgcgccttagat
aaacggcggctgaccattgaaaaccgtgaattgaaagcggagttagacgcgcaaagtggt
cccggccctcgcatattaggttcaacacccgctgttgcccgcctccgcaaaattctcagt
catatcaaagatacccccgctgatgtcttaattaacggtgaaacaggaaccggtaaagaa
ttggttgcgcgttttttacatgaccatagcgtacgagctaagcatccttttgtagcaatt
aactgcggggctgtccccgaaaccatgattgaaagcgagttgtttggccatgaagtcggt
gcttttaccggcgcgcagaaaaagcgagtaggcaaaatagcctttgccaataatggtact
ctcttcctagatgaaattgaaagcatgccgatggccttgcaaataaagcttttgcgggta
ctagaggaacgcagtgttgaaccgctgggaagcaaccaagtaatcccactcaatttacgg
gtgattgccgccaccaaaagtgatttaaagcatttaggtgagcaaggtgagtttcgcagc
gatctttattatcgcctcaatgtcgtagaggtctatatacctgcactacgcgagcgctgt
gaagacatccctttattacttgaaaacttcttacgggtagcagccgcccgttaccaacta
aatagcccggagatcagtcagcagcgcttatcagagctggtgcaacacaactggccaggc
aatgtacgagaattgcgtaatctggccgagcgttgggtactaatgggggaagacgcggct
tttaacgaagcgcaaaatgaccagcaaagcttaaacttggcggagcaactttttcgcttt
gagcggaccttattgcaagacgcactgcatcgccacaaaggtcacctaaaagcggtccaa
gaagaactgcacattggccgtaaaaccctttatgagaaaatgaaaaaataccaactcgat
aaaggtgactataaaaaccattaa

DBGET integrated database retrieval system