Agarivorans sp. TSD2052: M0C34_03305
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Entry
M0C34_03305 CDS
T08089
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
M0C34_03305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agz02000
]
M0C34_03305
02044 Secretion system [BR:
agz02044
]
M0C34_03305
Transporters [BR:
agz02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
M0C34_03305
Secretion system [BR:
agz02044
]
Type I secretion system
Adhesin protein transporter
M0C34_03305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
SLATT_1
Zeta_toxin
AAA_13
DUF1773
Motif
Other DBs
NCBI-ProteinID:
UPW19317
LinkDB
All DBs
Position
721890..724049
Genome browser
AA seq
719 aa
AA seq
DB search
MQDAKSRQQYADLDITAEHIDPLLNSLVFLSKYYGKPFSARALSVGLPLEDGLLSPALLP
RAALRAGMDASIVKKPIDNIPTLLLPCILLLKDGRSCVLVSRDKDTIEVAWPELPDSHEH
IPLAQLSPDYTGFCCYVRKRYRFDARSPESLSNKQGHWFWNTLRRSAPIYRDALVASLFL
NLFAIASPLFVMNVYDRVVPNSAIDTLWVLTVGMALVLVFDFALKQMRGYTLDLAAKKSD
ILLSARIFEKLLNIKAEVRPPSVGAFAKNVQEFDSIREFITSSTIAALVDVPFSLLFLAV
IAMVAGPLALVPAGAAVLMLLYSFYIKRKMHQEVELGSRFASQKNAHLIESLNGIESLKL
AGAESQFQHKWEELVGNIATWNMAIRKLATSVGNVNAFVSQSTTVLLVVVGVFQISQGNL
SMGGLVAAVMLTGRALVPFSQVSLLATRYNQAQSALENLEDIMQLPDENLERYMHRSHFD
GAISFSDVTFSYPGSDQQVLKQVSFSIKAKEKVAIIGKIGAGKTSVEKLLLSFYVPQEGA
IRLDGVDLKQISPADVRQKLGCLPQDINLFFGSIRDNITLGVPHIEDELIFRAAELAGVT
QFTDLDPEGLDRQVGERGQYLSGGQRQAVALARALLFNPPVLVLDEPTSSMDAFSENLVK
TRLKQVAEDKTFILITHKMSMLDLVDRIIVLERGRVVADGTKADVLELLRTGKVRATNE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagacgcaaaatcacggcagcaatacgctgatttagatattaccgcagagcacata
gacccactacttaacagtttggtgtttctatctaagtattacggaaaaccgttttctgct
cgcgcattatcggtgggattgccattggaagacgggctgctctctcctgccttgttacct
cgagcggctttacgggccggtatggatgcatctattgttaaaaagccgatagataacatt
cctacactgttgctcccgtgtattctgctacttaaagacggccgcagctgcgttctagta
tctcgagataaagatactattgaagtggcttggcctgaactgcctgacagtcatgagcat
atcccgctagcgcaactaagccctgattacaccggcttttgctgttatgtgcgcaaacgc
tatcgctttgatgcgcgctcccctgaatcgttaagtaacaaacaaggccattggttttgg
aatacattgcgccgttcagcccctatttatcgagatgctttagtggcgtcattatttttg
aatttgtttgccattgcctcccctttatttgtgatgaatgtctacgaccgagtggtgcct
aattccgcgattgatactttgtgggtgctcactgtgggcatggctttggtactggttttt
gactttgccctaaaacagatgcgtggttataccctcgatttagccgctaaaaagtctgat
attttattgtcggctcgaattttcgaaaaactactgaatattaaggctgaagtgaggccg
ccgtcggtaggggcatttgctaaaaatgtacaagagtttgattctattcgtgaatttatt
acctcttctactattgccgcattagtggatgtaccgttctccttattattcttggcggtg
attgcgatggtggcagggcctttagccttggtgcctgccggcgctgcggtattgatgttg
ttatattcgttttacatcaaacgtaaaatgcaccaagaagttgagctaggcagtcgcttc
gccagccaaaaaaatgctcacctgattgagagtcttaatggtattgaatcactgaaatta
gccggtgctgaaagtcagtttcagcataagtgggaagagttagtaggcaacatagctact
tggaacatggccattcgcaagttggctacctcggtgggtaatgtcaacgcttttgtctcg
caaagcaccaccgtgttgttggtggtggtgggagtattccagatttcacaaggtaatttg
tccatgggtgggttggtggcggcagtaatgcttactggccgagctttagtgcctttctct
caagtgtctttactagcaactcggtataaccaagcgcaatcagcacttgagaatttagaa
gatatcatgcaattgcctgacgaaaacttagagcgttatatgcaccgttctcactttgac
ggcgcaattagttttagtgatgtgacgtttagctatcccggcagtgaccaacaagtgctt
aagcaagttagcttttcgattaaggctaaagaaaaggtcgccattattggtaaaattggc
gccggtaaaaccagcgtagaaaagctactgctcagtttttatgtacctcaagaaggagct
attcgcttagatggtgtagatttaaagcaaattagccctgccgacgtgcgacaaaagctt
ggttgtttaccgcaagatatcaatctgttttttggctcaatccgcgacaacattacgctg
ggtgtgccgcatatcgaagacgagttaatattccgagccgccgagctagcgggcgtgact
caatttaccgaccttgaccctgaaggtttagaccgtcaagtaggcgagcgaggtcagtat
ttatctggtgggcagcgtcaagctgtggctttagctcgggcgctgttgttcaacccccca
gtactagtgttagatgagcctaccagtagcatggatgctttctctgaaaacttggtgaag
acccggcttaagcaagtggctgaagataaaacctttatcttaattacccacaaaatgtcg
atgttagatttggtcgacagaatcatcgtattagagcgtggccgagtagtggcagatggg
accaaagcggatgtattagaattgctacgcactggcaaagtgagagccaccaatgagtaa
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