Agarivorans sp. TSD2052: M0C34_04490
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Entry
M0C34_04490 CDS
T08089
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M0C34_04490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agz02000
]
M0C34_04490
Transporters [BR:
agz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
M0C34_04490
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UPW19542
LinkDB
All DBs
Position
complement(985714..987351)
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AA seq
545 aa
AA seq
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MQSKTVLSSIVCGLLLSSGSVLAEDIKQGGTLTVPIIGTGFVENFNPYTSKDLFHGVMFE
PLMIFNNMTGKTEWRLAKSAEYSDDLKSIVLTLREGLTWSDGSPLTAKDVAYSFTMTKET
SAFDQRGIWTDGNLTSVEVKDDTTVVFNLNEADSTFIWNLEKYHIVPEAIWSKAKDLTTF
TNPNPIGSGPMTTVKYVKTQQIELCRNPNYYLAGLPHLDCITYRSYNDNSQIQPALMKGE
IDWGSNFIADIDNTFVAANPEDHHYWYPANDAIHLYVNTKEEPFSHLDVRKALSMALDRA
EIVDIAAYGYPTANFNVGGIGELYGPFIDSEVTAKYQDITQYNPEKANQLLDAAGYKDTN
GDGFRQMKDGKRIEFDIEVVNGWTDWIQVVQMVTEYYEEVGIKANVKTVDWAVYDSALKD
ATYKMSINWSLVATHPILAYQEYFSTSRIGKTWHAGHGIHTPEIDALIDSFGDTNDAVAQ
AKIIKELQVFTAENLPFIPLFSNPTWFQYNSSKIVGWPNAENPYVQPVWYDGGKRILVLN
NLHLK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtaaaacagttttatcttctatcgtatgcggcttgctgctgtcatcgggaagt
gtgttggctgaagacatcaagcaaggtggaaccttaaccgtgccaattattggtactggt
tttgtagagaactttaacccatacacctcaaaagatttattccacggtgttatgttcgaa
ccgcttatgatctttaacaacatgaccggaaaaaccgaatggcgtttagctaaatctgcg
gaatactcagatgatttgaaatcaattgtacttactttgcgtgaaggccttacttggtca
gatggtagcccactaacagctaaagatgtggcttacagcttcaccatgacaaaagaaacc
agtgcttttgatcaacgtggtatttggacagatggcaatttaaccagtgttgaggtaaaa
gacgacactaccgtggtattcaatctaaacgaagctgactcaacctttatttggaactta
gagaaataccacattgttccagaagcgatttggagcaaagctaaagatctcaccaccttt
actaacccgaaccctatcggtagtggcccaatgaccacggtgaagtacgtaaaaactcag
caaattgaattatgtcgtaaccctaattactacctagcaggtttaccgcatctagattgc
attacttaccgttcttacaacgataactctcagatccaaccggcattgatgaaaggtgaa
attgattggggctctaacttcatcgctgatatcgacaatacctttgttgccgcaaaccca
gaagatcatcattactggtacccagctaatgacgccattcacctttacgtaaacactaaa
gaagaaccatttagtcacttagacgtgcgtaaagcgttatcaatggcattagatcgtgcc
gagattgttgatattgcagcctatggctaccctactgccaactttaatgtagggggtatc
ggtgagttatacggcccatttattgatagtgaagtgactgccaaataccaagatattact
caatacaacccagaaaaagcgaatcagttactcgatgccgctggttataaagataccaat
ggtgatggtttccgtcagatgaaagacggcaaacgcattgagtttgacattgaagtagta
aatggttggaccgattggattcaagtcgttcaaatggtgacagagtattacgaagaagtg
ggcattaaagctaacgttaaaacggttgattgggccgtttatgattcagcgctaaaagat
gcaacttacaaaatgtctatcaactggtctttggttgctactcaccctattctggcttac
caagaatacttctcaacctcgcgaattggtaaaacatggcacgcagggcatggtatccac
acgcctgaaattgatgccttaattgacagcttcggtgatactaacgatgctgtagcacaa
gccaaaataatcaaagagttacaggtgtttactgcggaaaatcttccgtttatcccactg
ttttctaacccaacttggttccaatacaacagttctaaaattgttggttggccaaatgcc
gaaaacccttatgtacaacccgtatggtatgacggtggtaaacgtatattggtgctaaat
aaccttcaccttaagtaa
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