Agarivorans sp. TSD2052: M0C34_04780
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Entry
M0C34_04780 CDS
T08089
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
agz
Agarivorans sp. TSD2052
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agz03400
]
M0C34_04780 (phrB)
Enzymes [BR:
agz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
M0C34_04780 (phrB)
DNA repair and recombination proteins [BR:
agz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
M0C34_04780 (phrB)
Prokaryotic type
M0C34_04780 (phrB)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UPW19597
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All DBs
Position
1055730..1057175
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AA seq
481 aa
AA seq
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MSKQLVWFRNDLRTKDNQALTTAVASGKPVLAVYLVCRHQWKQHHLAPIQADLIMRRLAQ
LQQDLALLNIPLLVVEIDSFNHVPRCLTELCQQYQISDVHCHYQYELNEQQRDNAVLSAL
SSNNVSLLQYHGECVMPPGSVLTKNRENFKVFTPFRKTWVSGLTEREFSPIAAPAAIDQA
LLPEAFLALLKNNSPLPCSYDRADSSKWTCDDPSIIQQLRDFSASKAADYKQDRDFPALA
ATSNLSAYLALGMLSPRQCLARIYLDHPHCLDAQEGGAFTWLSEIVWREFYRHLIAVNPR
LCKGEAFLAWTQSIAWQQDLHLLQAWQQGQTGYPIIDAAMRQLKYTGWMHNRLRMIVASF
LTKDLLIDWREGERWFMQHLIDGDFASNNGGWQWAASTGTDAQPYFRIFNPTTQAQRFDP
NGDFVRHWVPELSDIPGKKVHQPHSWAEKNGHRLAYPLPIVDHAIQRKLALSLFEQAKKS
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcaattagtatggtttcgaaatgatttacgaactaaagacaaccaggcctta
actaccgcagtcgctagcggtaagccggtattagcggtttatcttgtgtgccgacatcaa
tggaaacaacatcatttagcccccattcaagctgatttaatcatgcgtcgtttggcgcaa
cttcagcaagatttagccttactcaatatcccattattggtggttgaaattgacagtttc
aatcatgtgccgcggtgtttaaccgagctttgccagcaataccaaattagcgatgtacac
tgtcattaccaatacgaacttaatgagcagcagcgcgacaatgcggtattgagtgcctta
agttctaacaacgtgagtttgctgcaatatcatggtgaatgtgtcatgccgccgggcagt
gtgctgactaaaaaccgagaaaattttaaggtattcactccctttcgaaaaacgtgggtg
tcaggcttaacagaacgagaatttagtcccattgctgcgcctgcagcgattgatcaagcg
ctccttcctgaagcatttttagcattgttgaaaaacaactcgccactaccttgttcctat
gatcgagctgatagcagcaaatggacttgtgatgacccctcgattattcaacagttacgt
gattttagcgccagtaaagcggccgattataagcaagatcgtgatttcccagccttggct
gctaccagtaacttgtccgcctatttagccttggggatgttgtctccacgccaatgttta
gcgcggatttatctcgaccatcctcactgcttagacgcgcaagaaggaggagcgtttact
tggttaagtgaaattgtttggcgagagttttatcgccacttaattgcggtcaatcccagg
ttatgtaaaggcgaggcctttttggcgtggactcaatctattgcttggcaacaagacctt
catctattacaagcatggcaacaagggcaaacgggataccctattatcgatgcggcgatg
cgccaacttaaatataccggttggatgcataaccgcctgcgtatgattgtggccagtttt
ttaactaaagatctgttgattgattggcgcgaaggcgagcgctggtttatgcagcattta
attgatggtgattttgcttccaacaacggaggatggcagtgggccgcatcaacaggcacc
gacgctcagccttattttcgtatatttaaccccaccactcaggcgcaacgttttgacccc
aatggcgattttgttcgccattgggttcctgagcttagcgacattcccggtaaaaaagtc
catcaaccgcatagttgggctgaaaaaaatgggcacagattggcttatccactgccgata
gtggatcacgcgattcagcgtaaattagcattgagcttgtttgaacaggctaaaaaaagt
acttga
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