KEGG   Agarivorans sediminis: M0C34_05475
Entry
M0C34_05475       CDS       T08089                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
agz  Agarivorans sediminis
Pathway
agz03030  DNA replication
agz03430  Mismatch repair
agz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:agz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M0C34_05475
   03430 Mismatch repair
    M0C34_05475
   03440 Homologous recombination
    M0C34_05475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agz03032]
    M0C34_05475
   03400 DNA repair and recombination proteins [BR:agz03400]
    M0C34_05475
Enzymes [BR:agz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     M0C34_05475
DNA replication proteins [BR:agz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     M0C34_05475
DNA repair and recombination proteins [BR:agz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     M0C34_05475
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: UPW19732
LinkDB
Position
complement(1218734..1219378)
AA seq 214 aa
MNTSSPANTAVILDFETTGLSPNQGDRAIEIGAVLLEDGVATQRFQELMNPGFRVSSFIE
SYTGISNHMLQAAPPCDEVMERFYQFIGKHNLVAHNASFDQRFLAAEFAHIGRQIPGEFA
CSMLLSRRLFQDAPNHKLGSLVAYKNIDNNGVFHRALADAEMTAKLWLCLLEELNQEYQL
NEPTFTLMQKISVKSKNAVSQFLTRSSCRGPKSI
NT seq 645 nt   +upstreamnt  +downstreamnt
ttgaatacttcttcccctgccaataccgctgtcattctcgactttgagaccaccggctta
tctcctaaccaaggagatagagcgattgaaataggcgcagtattgcttgaagatggtgta
gccactcagcgttttcaagaattaatgaatccagggtttagggtgagttcatttatcgaa
agctacaccggcattagcaaccacatgctgcaagcggcgcccccttgtgatgaggtgatg
gagcgtttctatcaatttatcggcaagcacaatttagtggcgcataacgcctcatttgac
cagcgttttttagcggccgaatttgcacatataggtcgtcaaatccctggggagttcgct
tgttctatgctgctatcaaggcgtttattccaagatgcccccaatcataaattgggcagc
ttagtcgcctataagaacattgataacaatggggtgtttcaccgagccttggccgatgcc
gagatgacagcaaagctctggttatgtttactcgaagaattaaatcaagagtaccaattg
aacgaacccacttttacactaatgcagaaaatcagcgttaaaagcaaaaatgccgttagc
cagtttttaacccgctcctcttgccgaggaccgaaatcaatataa

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