Agarivorans sediminis: M0C34_06025
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Entry
M0C34_06025 CDS
T08089
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
agz
Agarivorans sediminis
Pathway
agz00300
Lysine biosynthesis
agz01100
Metabolic pathways
agz01120
Microbial metabolism in diverse environments
agz01230
Biosynthesis of amino acids
Module
agz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M0C34_06025 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
agz01002
]
M0C34_06025 (dapE)
Enzymes [BR:
agz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
M0C34_06025 (dapE)
Peptidases and inhibitors [BR:
agz01002
]
Metallo peptidases
Family M20
M0C34_06025 (dapE)
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Ortholog
Paralog
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Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UPW20693
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All DBs
Position
complement(1340148..1341293)
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AA seq
381 aa
AA seq
DB search
MKHMSDSPVLNLAKDLISRPSVTPEDYDCQKLMAERLSPVGFNIEEMVFEDTTNMWARKG
KTSPLFCFAGHTDVVPPGPVEKWHTPPFEPTVIDGVLHGRGAADMKGSLAAMVVATERFV
ADYPNHKGSIAFLITSDEEGPFINGTTRVVDTLMARNEIIDMCLVGEPSSTHRVGDVVKN
GRRGSLTGDLVVKGMQGHVAYPHLAKNPIHDAAPALAELAAMHWDNGNQFFPPTSFQIAN
IHSGTGASNVIPGELDVQFNFRYSTELSDQDIVKRVHNIFDSHGLDYQLDWTYNGQPFLT
EEGDFLSAVSAAVTKVAKTAPELLTTGGTSDGRFIAKMGTQVVELGPINATIHKVNECVK
VADLEQLTDMYYELLVNVLGQ
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
ataaaacacatgtctgatagcccagtgttaaatctagccaaagatctcataagccgacca
tcagtgacgcctgaagattacgattgtcaaaaactaatggccgaacgcttgagccctgtg
ggtttcaatatcgaagaaatggtatttgaagacaccactaatatgtgggcccgcaaaggt
aaaaccagcccactgttttgttttgctggacataccgatgtagtgccgcctggtcctgta
gaaaaatggcacactcccccttttgagccaaccgttatcgatggcgtattgcatggtcgt
ggcgctgcagatatgaaaggttctttagctgctatggtggtcgctactgaacgctttgtc
gctgattatccaaaccataaaggctctatcgcatttctgatcacctctgacgaggagggg
ccgtttattaacggtaccactcgtgtggttgatactttaatggcccgaaatgaaattatt
gatatgtgtttagtaggagaaccctcttctacccaccgcgttggcgatgtagttaaaaat
ggtcgcagagggtcactcaccggcgatctcgtcgtgaagggtatgcaaggtcatgtcgcc
tacccgcatctcgcgaaaaacccgattcatgacgccgctcctgccttagccgagctagca
gcaatgcattgggataatggcaatcagtttttccctcccactagttttcagatagcgaat
atacactctggaacgggtgcctctaatgtaatacctggtgagctagatgttcagtttaat
ttccgctactccactgaacttagcgatcaagacattgttaaacgagtacataacatcttt
gatagccatggcttagattatcaattggactggacctacaacggccaaccttttttaact
gaagaaggcgactttcttagtgcggttagcgctgcagtgaccaaagtggctaaaacagcc
cctgaattactcactacaggcggtacttcagatggtcgattcattgccaaaatgggtacc
caagtagttgaattagggcctattaatgccactatccataaagtaaacgagtgcgtgaag
gtagccgatctagaacagctgaccgatatgtactacgaactattggtgaacgtacttgga
cagtaa
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