Agarivorans sp. TSD2052: M0C34_06390
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Entry
M0C34_06390 CDS
T08089
Symbol
rlmH
Name
(GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
agz
Agarivorans sp. TSD2052
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agz03009
]
M0C34_06390 (rlmH)
Enzymes [BR:
agz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
M0C34_06390 (rlmH)
Ribosome biogenesis [BR:
agz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
M0C34_06390 (rlmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
DUF5484
Motif
Other DBs
NCBI-ProteinID:
UPW19892
LinkDB
All DBs
Position
complement(1415443..1415913)
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AA seq
156 aa
AA seq
DB search
MKIQLVAVGTKMPAWVETAYQEYSRRFPKDMPLELIEVNAGKRGKNADIKRILDKEGEAT
LAVIPKGNRVVTLEVTGKPWTTPQLAQQLDAWKMDGRDVSLLIGGPEGLAPSCIKIAEQR
WSLSALTLPHPMVRVIVAETLYRAWSVTANHPYHRE
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacagttagtagcggtaggcacaaaaatgcctgcctgggtcgaaactgcctac
caagaatactcccgccgctttcccaaagatatgcccctagagttaatcgaggttaacgca
ggcaaacgtgggaaaaatgccgatattaagcgaattcttgataaagaaggcgaagcgaca
ctggcggtaatacctaaaggaaaccgagtggtcactttagaggtcaccggcaaaccatgg
acgactccacaattagctcagcaattagatgcctggaagatggatggccgagacgttagc
ctattaattggtggccctgaaggcttagcacccagctgtattaaaatagcagaacaacgc
tggtcgctgtcggcactaacccttcctcacccaatggttagagtgatagtcgcagaaacg
ctataccgtgcttggagcgtcactgccaaccacccctaccatagagagtag
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