Agarivorans sp. TSD2052: M0C34_07275
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Entry
M0C34_07275 CDS
T08089
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz00521
Streptomycin biosynthesis
agz00523
Polyketide sugar unit biosynthesis
agz00525
Acarbose and validamycin biosynthesis
agz00541
Biosynthesis of various nucleotide sugars
agz01100
Metabolic pathways
agz01110
Biosynthesis of secondary metabolites
agz01250
Biosynthesis of nucleotide sugars
Module
agz_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
M0C34_07275 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
M0C34_07275 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
M0C34_07275 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
M0C34_07275 (rfbB)
00525 Acarbose and validamycin biosynthesis
M0C34_07275 (rfbB)
Enzymes [BR:
agz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
M0C34_07275 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
adh_short
adh_short_C2
KR
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
UPW20055
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All DBs
Position
1599207..1600280
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AA seq
357 aa
AA seq
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MRNLLVTGGAGFIGVNFVHYWLSNNPQDKVVVLDALTYAGNKASLEPVAANPNFSFVKGD
ICDTELVEKLLNQHHIDTLVHFAAESHVDRSITGPDAFIETNIMGTYSLLKAAKKVWIDQ
PAIDGKPAVAHRFHHVSTDEVYGTLSPTDPAFTEDTAYAPNSPYSASKAASDHLVRAYHH
TYGLQVTTSNCSNNYGPYHFPEKLIPLIITNILQDKPLPVYGDGQQIRDWLYVEDHARGI
ELVLNKGRVGENYNIGGNNEWANIDIVKLVCKQMNNKFIQQPQLAEQFPLAKQVLHGKAE
QLITYVEDRAGHDRRYAIDATKTNHELGYEPKESFDSGFAKTLDWYLSNESWWKPLL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatttattagtgaccggtggagccggctttatcggggttaattttgtccattat
tggttaagtaataaccctcaagataaagtggtagtgcttgatgcgctaacgtatgcaggt
aataaagctagtctcgaaccagtagcggccaaccctaactttagctttgtaaaaggggat
atctgcgataccgagttagtagaaaaactactaaaccaacaccatatagatactttagtg
cactttgcggctgaatctcatgttgaccgctctattactgggccagatgcctttattgaa
acgaatattatgggtacctatagcttattaaaagccgccaaaaaagtatggatagatcag
cccgcaatagatggtaaaccagctgtagctcaccgctttcaccatgttagtacagacgaa
gtatacggaacattaagccctactgatcctgcatttaccgaagataccgcttatgcgcct
aactcgccgtattcggcctctaaagccgccagtgatcatttggttcgcgcttatcatcac
acctacggattacaggttaccacctctaattgttcaaataactacgggccttatcatttc
cctgaaaagttaatcccgctaattatcaccaacattttgcaagacaaacctctgccagtg
tatggcgacggtcaacaaattcgtgactggttatacgtagaagatcatgcgcgcggtatt
gaacttgttctaaacaaaggccgtgttggcgaaaactacaacatcggcggcaataacgaa
tgggccaatatcgatattgttaaattagtgtgtaagcagatgaataacaagtttattcag
caacctcagctggcagaacaattccctttagcgaaacaggttttacatggtaaagcagaa
caactgattacctatgttgaagatcgcgcaggacatgaccgccgctacgccattgatgct
accaaaaccaatcatgaattaggttacgagcctaaagaatcttttgacagtggctttgca
aaaaccttagattggtatttaagcaacgaatcttggtggaagccattactttaa
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