Agarivorans sp. TSD2052: M0C34_07955
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Entry
M0C34_07955 CDS
T08089
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz02020
Two-component system
agz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M0C34_07955
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M0C34_07955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
agz02022
]
M0C34_07955
02035 Bacterial motility proteins [BR:
agz02035
]
M0C34_07955
Two-component system [BR:
agz02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
M0C34_07955
Bacterial motility proteins [BR:
agz02035
]
Flagellar system
Flagellar assembly proteins
Others
M0C34_07955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_30
FleQ
Mg_chelatase
MerR
AAA_19
Sigma70_r4_2
AAA_16
DUF2089
HTH_28
MFD_D3
AAA_3
AAA
HTH_10
HTH_23
HTH_11
MCM
HTH_3
Motif
Other DBs
NCBI-ProteinID:
UPW20185
LinkDB
All DBs
Position
1754894..1756228
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AA seq
444 aa
AA seq
DB search
MSQSKILIVEDDAGLREALIDTLGLAGYHCEQAESGEAALVILSNQSIDLVVSDVQMGGM
DGLSLLKNIKQKWPLIPVLLMTAYAKIDDAVSAMRDGAIDYLSKPFSPEVLLNQVGRFAP
AVKVEKREPVYGDPVTEALLNISQKVAASEATVLISGPSGAGKEVLSRYIHDCSPRSEQA
FVAINCAAIPENMLEATLFGYEKGAFTGAIKACPGKFEQAQGGTILLDEISEMDLGLQAK
LLRVLQEKEVERLGSRKMIKLDVRVIATSNRDMREIVSLGHFREDLYYRLNVFPLNWVPL
NQRKGDIIPLANHLLRRHSERACELSLSAQHKLLNHIWPGNVRELDNVMQRALILANEST
IDADCLIIENQYEPMLFTEAAEENGSNGEPLGLELKQQEQQIILETLKACNGKRKDVAEK
LGISPRTLRYKLARIKGAGIELPA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatcaaaaatactcattgttgaagatgacgccggactacgcgaagcactcatt
gatacgcttggattggcggggtatcactgtgaacaagcagagagtggtgaggccgcatta
gttattttgtctaatcaatctattgatctggtggttagtgacgtgcaaatgggcggaatg
gatggcttaagtttattaaaaaacattaagcaaaaatggcctttaatccccgtgttactg
atgacggcctacgccaaaattgatgatgccgtttcagcaatgcgagacggtgccattgat
tacctatctaaacctttctcgcccgaggtgctgctcaatcaggtggggcggtttgctcca
gctgtaaaggttgaaaaaagagagcctgtttatggcgatccagtcaccgaagcattacta
aatatcagccaaaaagtggccgcttctgaagcgacggtattaattagtgggcccagtggt
gcaggtaaagaggtgttgtctcgttatatccatgattgttcgccacgcagcgagcaagcg
tttgttgcgattaactgtgctgcgatccctgaaaatatgcttgaggccacgttgtttggt
tatgaaaaaggggccttcactggcgctataaaagcctgcccaggcaaatttgaacaagct
cagggcggcaccatactgttagatgaaatcagcgaaatggacttagggctgcaagctaaa
ctgctgcgggtactgcaggaaaaagaagttgagcgtttgggcagtcgcaaaatgattaag
ttagatgttcgtgtcattgccaccagtaaccgtgatatgcgagaaattgtcagtttagga
cattttcgagaagacctatattaccgcctgaacgtgttcccattaaattgggtgccgcta
aatcagcgtaaaggcgatatcatccccttggctaaccatttgttgcgaagacatagtgag
agggcctgtgagttaagtttaagtgctcaacataagttgttgaatcacatttggccgggc
aatgtccgtgagctagataatgttatgcaacgcgcgctaattttagccaatgagtccact
atagatgctgattgtttgattattgaaaatcagtatgagccaatgctattcactgaagcg
gcggaagaaaatggttcaaatggcgaacctttaggtttagaacttaagcaacaagagcaa
caaataattttagaaaccttaaaagcctgcaacggtaagcgcaaagatgtggcggaaaaa
ttgggtattagtcccagaaccttacgctataaacttgctcggataaaaggtgcaggaatt
gaacttcctgcttaa
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