Agarivorans sp. TSD2052: M0C34_07970
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Entry
M0C34_07970 CDS
T08089
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
agz
Agarivorans sp. TSD2052
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agz03032
]
M0C34_07970
03036 Chromosome and associated proteins [BR:
agz03036
]
M0C34_07970
03400 DNA repair and recombination proteins [BR:
agz03400
]
M0C34_07970
DNA replication proteins [BR:
agz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M0C34_07970
Chromosome and associated proteins [BR:
agz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
M0C34_07970
DNA repair and recombination proteins [BR:
agz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
M0C34_07970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
MamS_MamX
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
UPW20188
LinkDB
All DBs
Position
1759021..1759305
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSDLIEILASKHIQFTSKEIESAIKEILEQMTCSLQEGDRIEIRGFGSFSLHFRAPRV
GRNPKTGEKVELSGKHVPHFKPGKELRERVNNDL
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatctgatttaattgaaatactcgcgagtaaacatattcaatttaccagtaaa
gaaattgagtcggcaattaaagaaatcttagagcaaatgacctgttcactacaggaaggc
gataggattgaaatccgtggttttggtagtttttctctgcattttagagcgcctcgagta
ggtagaaatccaaagaccggtgagaaagtcgagctttctggtaaacatgttcctcacttt
aaacctggtaaagaattgcgagaacgggtaaataacgacctatag
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