Agarivorans sp. TSD2052: M0C34_08920
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Entry
M0C34_08920 CDS
T08089
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M0C34_08920 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agz03000
]
M0C34_08920 (nifA)
Transcription factors [BR:
agz03000
]
Prokaryotic type
Helix-turn-helix
Other families
M0C34_08920 (nifA)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
GAF_2
AAA_5
AAA
Mg_chelatase
AAA_2
bpMoxR
AAA_3
AAA_16
Parvo_NS1
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UPW20366
LinkDB
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Position
1963488..1965035
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AA seq
515 aa
AA seq
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MEYSTTRETRIAESHLAALYEVSSVLTNSLDYKQSVTKVLQVLHDTAMLQHAMLALISEN
EDQLTIDTVHTPNNFGDSMGKNIRYRPGEGIVGTVLTQKQPIVLSKVSNDLRFADKLDLY
ALDLPFIAVPIKKSSEVLGVLAAQPQIDDPEKLALFTRFLEMTANLIAKSVLLAKDVAVQ
TNQLEAERDRLRRKVRSNYSLDNIVGHSQVMRRVFEQIRLVSKWDSTVLIRGESGTGKEL
IANAIHYNSPRATGPFIKLNCAALPDNLLESELFGHEKGAFTGAVKQRKGRFEMADGGTL
FLDEIGEISAAFQAKLLRVLQEGEFERIGSTQTITVDVRILAATNRNLEEEVKQDRFRED
LYYRLNVMPMFPPPLRDRIEDLPDLAEFLIEKLSKQQRRKLSLTDSAIRMMMAYDWPGNV
RQLENLLERASVMSENGIIDQDLIVIDGIEGQNFSRRPSVDKALIEDPDMDERERVVAAL
EQAGWVQAKAARLLNMTPRQIAYRIQVMNINVRQL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaatattcaacaacacgcgaaacacgcattgcagaaagtcatttagctgctctgtat
gaagttagcagcgtgctaactaatagcttagattacaagcaaagtgtcaccaaagttcta
caggttctgcatgacacggcaatgttgcaacatgcgatgttagctttaatctcagaaaat
gaagatcaactgactattgatacggtacataccccaaataacttcggtgattctatgggg
aaaaatattcgttatcgccccggtgaagggattgtaggtacggtattaacccaaaagcag
ccaattgtattgagcaaagtctctaatgacttacgttttgccgacaagcttgatttgtac
gccttagatttaccttttattgctgtgccaattaaaaagtctagtgaggtattaggagta
ttggccgcccaaccgcaaattgacgatcctgaaaagttggccttgttcacccgtttccta
gagatgaccgccaacttaatcgctaaaagtgttttattagctaaagacgttgcggtacaa
accaatcagttagaagccgagagagataggctcaggcgtaaggtaagaagcaattacagc
ttagataatattgttggccattctcaggtgatgcgtcgcgtatttgaacagatccgtttg
gtatcgaaatgggatagcacggtcttgattcgcggagaatctggaaccggtaaggagctg
attgctaatgctattcattataactcgccacgtgcgaccggaccttttataaagcttaac
tgcgcagctttacctgacaatttattggagtctgaattgtttggccatgaaaaaggggct
ttcaccggagcggtaaagcagcgtaaggggcgttttgaaatggctgacggtggtaccttg
ttcttagatgagattggtgagatctcggcggcttttcaggctaagttacttagggtatta
caagaaggagagtttgaacgcattggcagtactcaaaccattactgttgatgtgcgaatt
ttagcggcgaccaaccgtaaccttgaggaagaggtgaaacaagatcgctttcgagaagat
ctgtattaccgacttaatgtgatgccaatgtttccgcccccattacgtgatcgcatcgaa
gacttgcctgatttggcggagttcctgattgaaaagctgagtaaacagcagcgtcgtaag
ttgtcgttaaccgacagtgcgatacgcatgatgatggcgtatgactggccaggtaatgtt
cgccaattagaaaacttactggaacgtgcatcggtgatgagcgaaaacggaattatcgat
caagacttgatcgtcattgatggcattgagggccaaaattttagtcgccgccccagcgtg
gataaagcgttgattgaagaccctgatatggacgagcgagaaagggtggtggcagcacta
gagcaagcgggttgggtacaagctaaagccgcgcgtttgttaaacatgacgccgaggcaa
atcgcttaccggattcaggtgatgaatattaacgtgcgccaactgtaa
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