Agarivorans sediminis: M0C34_08965
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Entry
M0C34_08965 CDS
T08089
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
agz
Agarivorans sediminis
Pathway
agz03030
DNA replication
agz03430
Mismatch repair
agz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M0C34_08965
03430 Mismatch repair
M0C34_08965
03440 Homologous recombination
M0C34_08965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agz03032
]
M0C34_08965
03400 DNA repair and recombination proteins [BR:
agz03400
]
M0C34_08965
Enzymes [BR:
agz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M0C34_08965
DNA replication proteins [BR:
agz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M0C34_08965
DNA repair and recombination proteins [BR:
agz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M0C34_08965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UPW20375
LinkDB
All DBs
Position
1976939..1977646
Genome browser
AA seq
235 aa
AA seq
DB search
MFKRFTPLYKLNREREKLLTNISLAPCLRDVLSHPIPQAGTPLAELEFLVFDIETTGLNA
AVDNILSVGYVTLKQSVIDLKSAKHFYVSSQQSVKAETAVINHIVPEMLQDGLAIDEVMN
HLFAAMCGKVLVVHGSSVEKQFIERYVRQRYFCERLPLLWLDTLTLEKSLIANANHQKNG
DYRLASVRSRYGLPEYNAHSALIDAIATAELFMAQTKRIFSNTPQVLNGVVKPQV
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacgctttacgcctctatataagctaaacagagaacgagaaaagctactgact
aatattagtttagcgccatgcctgcgcgatgtgttaagccatcctatcccccaagcgggg
accccgttagctgagctagagtttttagtgtttgatatcgaaacaaccggcttaaatgcc
gcggtagacaacatcttgagtgttggatatgtaaccttaaaacaatcggttattgatctt
aaaagtgccaaacacttttatgttagtagtcagcaaagtgttaaagctgaaaccgccgtt
attaatcatatcgttcctgagatgttacaagatgggcttgctatagatgaagtgatgaac
catctgttcgctgcaatgtgcggtaaagtattagtggtgcatgggagtagtgttgaaaag
cagtttattgagcgatatgtacgacagcggtatttttgcgaaagactaccgctattgtgg
ctagatactttaacgcttgagaagtctctcattgccaatgctaatcatcaaaaaaacggt
gattatcgtttagcttcagtaagaagtcgttatggtttacctgaatataacgcacacagt
gcactgattgatgctattgccaccgcagagctttttatggctcaaactaagcgaatattt
tctaatactccgcaagtactgaatggtgttgttaagccacaagtctag
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