Agarivorans sp. TSD2052: M0C34_10325
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Entry
M0C34_10325 CDS
T08089
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M0C34_10325 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agz03400
]
M0C34_10325 (ruvA)
DNA repair and recombination proteins [BR:
agz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M0C34_10325 (ruvA)
RecFOR pathway proteins
M0C34_10325 (ruvA)
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Motif
Pfam:
RuvA_N
HHH_5
HHH
RuvA_C
HHH_2
RecR_HhH
IMS_HHH
5_3_exonuc
Transposase_20
HTH_78
Motif
Other DBs
NCBI-ProteinID:
UPW20616
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Position
complement(2255681..2256301)
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AA seq
206 aa
AA seq
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MIATIKGILEDKAPPFVLIDVAGVGYEIQLPMSCFYQLPELGESVRLLTHFIVREDAQLL
YGFHDNQSRSLFKELIKVNGIGPKVALAILSGLSCEQFVFAVKHEDLSSLVKVPGIGKKT
AERLLVEMKDRLKNWNVELPATPISDTINANGDLPLRPTVDPKEEAIAALESLGYKIVQA
EKLVKQVWIANMTSEQLIREALKAAL
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
gtgatagccacgattaaaggtatcttagaagataaagccccaccttttgtattgattgat
gtagctggagtagggtacgagatacaacttccgatgagttgtttttatcaattaccagag
ttaggtgagtcagtgcgcttactgactcactttattgtacgagaagacgctcagctactt
tatggtttccacgataatcaatcacgttctttgttcaaagaattgatcaaggttaatggc
attgggcctaaagttgccttagctatcttgtctggcttaagttgtgaacaattcgttttt
gcagtcaaacacgaagatttatccagtttagtcaaagtccccggaattggaaaaaagacc
gctgaaagactattggtagaaatgaaagataggcttaaaaattggaacgttgaactccca
gcaacgccgataagtgatacgattaatgcaaatggagatttgcctttgcgacccacggtt
gaccctaaagaagaagctatcgcggcattagagtctcttgggtataaaatcgtgcaagct
gagaaactggttaagcaagtttggatcgccaatatgacaagtgaacaattgatacgtgaa
gccttgaaggctgcgctgtaa
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