Agarivorans sp. TSD2052: M0C34_11270
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Entry
M0C34_11270 CDS
T08089
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz00020
Citrate cycle (TCA cycle)
agz00640
Propanoate metabolism
agz00660
C5-Branched dibasic acid metabolism
agz00720
Other carbon fixation pathways
agz01100
Metabolic pathways
agz01110
Biosynthesis of secondary metabolites
agz01120
Microbial metabolism in diverse environments
agz01200
Carbon metabolism
Module
agz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
agz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
M0C34_11270 (sucD)
00640 Propanoate metabolism
M0C34_11270 (sucD)
00660 C5-Branched dibasic acid metabolism
M0C34_11270 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
M0C34_11270 (sucD)
Enzymes [BR:
agz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
M0C34_11270 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UPW16827
LinkDB
All DBs
Position
complement(2489770..2490642)
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AA seq
290 aa
AA seq
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MSILIDKNTKVICQGFTGGQGTFHSEQAIEYGTQMVGGVSPGKGGQTHLGLPVFNTVSEA
VQATGADATVIYVPAPFCKDAILEAIAAGIKIIITITEGIPTLDMLDVKVKLDEAGARMI
GPNCPGVITPDQCKIGIMPGHIHQAGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGG
DPIPGSNFIDILEMFQNDPKTEAIVMIGEIGGSAEEEAAAYIKANVTKPVVSYIAGVTAP
PGKRMGHAGAIIAGGKGTAADKFAALEDAGVKTVRSLADIGKALREITGW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttaatcgacaaaaataccaaggtgatctgtcagggtttcacgggtggacag
ggtacttttcactcagaacaagcgattgagtacggaacccaaatggtgggtggtgtatca
cctggtaaaggtggtcaaacgcatttaggtctgcctgtatttaataccgtaagtgaagca
gtacaagctactggcgctgatgctacagtaatctatgtacccgcgccattttgtaaagac
gctatcttagaagccattgctgcaggcattaaaatcatcatcactattactgaaggcatc
ccaactttagatatgcttgacgtgaaagtgaagctagatgaagccggtgcacgtatgatt
ggccctaactgcccaggtgttatcacgcctgatcagtgtaaaattggcatcatgcctggt
cacattcatcaagcaggtaaagtgggtatcgtatcacgttctggtacactcacttatgaa
gcggttaagcagactacagatgaaggtttcggccaatctacctgtgttggtattggtggg
gaccccattcctggttcaaacttcatcgacattctagaaatgttccaaaacgaccctaaa
accgaagccatcgtaatgattggcgaaattggtggtagtgcggaagaagaagctgcggca
tatattaaagccaatgtaactaaacctgttgtatcttacatcgcgggtgttacagctcct
cctggcaagcgcatgggccacgctggtgccattatcgctggcggtaaaggtactgcagca
gataagtttgctgccttagaagatgcgggtgtgaaaacggttcgtagcttagccgatata
ggcaaagcactccgtgaaattaccggctggtaa
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