Agarivorans sp. TSD2052: M0C34_11470
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Entry
M0C34_11470 CDS
T08089
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz00061
Fatty acid biosynthesis
agz00071
Fatty acid degradation
agz01100
Metabolic pathways
agz01212
Fatty acid metabolism
agz02024
Quorum sensing
agz04146
Peroxisome
Module
agz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
M0C34_11470 (fadD)
00071 Fatty acid degradation
M0C34_11470 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
M0C34_11470 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
M0C34_11470 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
agz01004
]
M0C34_11470 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agz04147
]
M0C34_11470 (fadD)
Enzymes [BR:
agz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
M0C34_11470 (fadD)
Lipid biosynthesis proteins [BR:
agz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
M0C34_11470 (fadD)
Exosome [BR:
agz04147
]
Exosomal proteins
Exosomal proteins of breast milk
M0C34_11470 (fadD)
Exosomal proteins of breast cancer cells
M0C34_11470 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UPW16867
LinkDB
All DBs
Position
complement(2533584..2535245)
Genome browser
AA seq
553 aa
AA seq
DB search
MDKVWLNRYPKDVPAEIDSTRYQTLIDVFEEGAAKHADRVAFINMGQVMTYRRLEEQSRA
FAAYLQNELKLKRGDRVALMMPNLLQYPICLFGALRAGMVVVNVNPLYTPRELKHQLNDS
GAKAIVIVSNFAHILEEIVEETGVEHVILTRLGDQLSATKRTLVNFVVKYVKKMVPKYHL
PHAQSLRYVLSKGQHLQYVRPEVNSEDLAFLQYTGGTTGVAKGAMLSHSNMVANLLQALG
IVGPCLREGKEIVVTALPLYHIFALTANCMVFFALGCQNLLITNPRDIPTFVKELGKVPF
TAITGVNTLFNALLNHADFASLDFSLLRLSLGGGMSVQRAVAERWQEVTGSRLIEGYGLT
ECAPLVTVCPYDLEAYNGSIGLPAPSTDIKLVDDDGAEVAEGESGEILVKGPQVMQGYWQ
RPEATAESMPGGWFATGDIGTVDEQGFFHIVDRKKDMILVSGFNVFPNEIEEVISGNAKV
LEVAAVGVPNEVSGEAVKVFIVKKDDSLTEKQIVEHCREFLTAYKVPKLVEFRDELPKTN
VGKILRRALRDEA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
gtggataaggtttggcttaatcgataccctaaggatgttcctgcagaaatagactcaacg
cgctatcaaaccttgattgacgtgtttgaagagggtgctgccaagcatgccgacagagta
gcatttatcaatatgggacaggtgatgacttatcgccgcctagaggagcaatcaagagcg
tttgctgcctacctacaaaacgaattgaagctaaagcgcggtgaccgagtcgccctgatg
atgccaaatttgttgcagtatcccatttgcttatttggtgccttacgagcaggtatggtg
gtcgtgaatgttaatccactttacacgcctcgtgagctaaaacaccaacttaatgacagt
ggtgctaaagctatcgttattgtttctaactttgcccatatccttgaagaaatagtcgaa
gaaaccggagttgagcacgtcattctcactcgcttaggtgaccaactgtctgcgactaaa
cgcacgttggtcaactttgttgtgaaatatgttaagaaaatggtacctaaataccatttg
ccgcatgctcagtcgttgcgttatgtattgtctaaaggtcagcacttacaatatgtgcga
cctgaagtgaacagtgaagacttggccttcttgcagtataccggtggcactacaggggtc
gccaaaggcgccatgttatcgcatagcaatatggtcgccaatttactacaagccttaggc
attgtaggcccttgtttacgtgaaggaaaagagattgttgtaacggctttgccgctctac
catatctttgctttgaccgcgaactgcatggtattttttgcgttgggctgtcaaaactta
ttaatcactaaccctcgtgatattcctacttttgtaaaagaacttggtaaagtgccattt
accgctatcactggggtaaataccctgtttaacgccttgttaaaccatgcggacttcgcc
agcttagatttttctctattacgcttgtctcttggtggtggcatgtcagttcaacgtgcc
gttgccgagcgttggcaagaggtcactggatcgcgcttaattgaaggctatggcttaact
gagtgcgcgccattggtaacggtttgtccttacgacttggaagcatacaatggcagcatt
ggtttaccggcgccgtctacagacattaaactggttgatgacgatggtgcagaagtcgct
gaaggtgaatcgggcgaaatcttagtgaaaggccctcaagttatgcaaggctactggcag
cgtcccgaagcaacggctgagtcaatgccgggtggatggtttgccacgggggatattggc
accgttgatgaacagggctttttccatattgtagaccgtaaaaaagatatgattttggtg
tctggattcaacgtgttccctaatgaaatcgaagaagtcatttcaggtaatgccaaagtg
cttgaagtggccgcagtgggcgtccctaatgaggtgagcggcgaagcggttaaggtattc
atcgttaagaaagatgactctttaaccgagaaacagattgtagaacattgccgagaattc
ttaaccgcctataaagtgcctaaattagttgagtttagagatgaacttcctaaaacaaat
gtgggcaagatcttgcggagagccttgcgcgacgaggcataa
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