Agarivorans sediminis: M0C34_11710
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Entry
M0C34_11710 CDS
T08089
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
agz
Agarivorans sediminis
Pathway
agz03030
DNA replication
agz03430
Mismatch repair
agz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M0C34_11710 (dnaX)
03430 Mismatch repair
M0C34_11710 (dnaX)
03440 Homologous recombination
M0C34_11710 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agz03032
]
M0C34_11710 (dnaX)
03400 DNA repair and recombination proteins [BR:
agz03400
]
M0C34_11710 (dnaX)
Enzymes [BR:
agz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M0C34_11710 (dnaX)
DNA replication proteins [BR:
agz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M0C34_11710 (dnaX)
DNA repair and recombination proteins [BR:
agz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M0C34_11710 (dnaX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_14
AAA_5
AAA_2
AAA_18
AAA_16
HEAT_spiro
AAA_30
TsaE
AAA_7
AAA_assoc_2
nSTAND3
TniB
PIF1
Rad17
Motif
Other DBs
NCBI-ProteinID:
UPW16911
LinkDB
All DBs
Position
complement(2582518..2584752)
Genome browser
AA seq
744 aa
AA seq
DB search
MNYQALARKWRPKTFQQVVAQQHVLAGLINSLDQQRLHHAYLFSGTRGVGKTTIARLFAK
SLNCEQGVSSQPCGKCSNCIEVDQGNFVDLLEIDAASRTKVEDTRELLDNVQYSPAKGRY
KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFHLKALNE
DQISKQLAHILDAEQRAYQPSALNALAHAADGSMRDALSLTDQALALSNQQLEYQQVLDM
LGVLDPHQLRQLLCHVVAGQTESVFSKVSELASLAPDYEYLHQQLAEIIHKVSMAQVLPA
SQSDETIQMLAEQLDAQLLQLLYQIVITGKRDFAYAPNPRVGFEMTVLRMLAFQPVSAET
ALVGEPSINASPSNAELEDSSLVKEQQEILEQATQQGYQLQPQPAQTTHETPLVEQDKAE
RENQREQSIAKLKTQLRADDKQSSPDKRVQSKPIVDAPKVEPHTTPVEAVLPAASIPASS
ANSEQSITQTSELNEQLPPVDDSYYAQLADRDDEQAEHDPTYSVDYMPLDVESASAPAAS
VAPEQATPIEDTASLLQLRSQLRGRGKSEKKSEGAQASLNIDRLATSTSQANIADGVGHS
IEEPLQAAEKPSFQAQASDENERWAEMVNYMELGPIARQIAINSLYSFDGTNVGLLLKPD
LSHLPKPSSLTELKQQLSVCLKTEVELRIEVGEDLAQKTPLELQQLLHIKNTEAAVQRLL
GDQNIQILQQQFGAELDKESVKYH
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaattaccaagcactagcaagaaaatggcggccaaaaacctttcaacaagtggttgca
cagcaacacgttcttgcgggcttaattaattctttagaccagcagcgcctgcaccacgct
tatttgtttagtggtacgcgtggtgtggggaaaactaccatcgcgcgcttgttcgccaag
agcttaaactgtgagcaaggtgtatcatctcagccctgtggaaaatgtagcaattgtata
gaagttgaccaaggtaattttgttgatttattagaaatagatgccgcatctcgaactaaa
gttgaagatacccgtgaactattagataacgtgcagtacagcccagcgaaagggcgttac
aaagtttaccttatcgacgaagttcatatgttatcgcgccatagttttaatgctttactt
aaaacgctggaagaaccacctgaacatgttaagtttctactggctactactgatccccaa
aagttgccggtaacggtattgtcccgctgtttacagtttcacttaaaagcgttaaacgaa
gatcaaatctccaagcaattggctcacattctcgatgcagagcaaagagcctatcaacct
tcggcactaaacgcattagcccatgctgctgatggcagtatgcgcgatgctttgagcctt
accgaccaagctttggctttgtctaaccaacaacttgaatatcagcaagtactagacatg
ttaggggtgcttgatccccatcagttacgacaactgctatgccatgttgttgcagggcaa
acagagtcggtatttagcaaagtatctgaactagcgagcttggctcccgattatgagtac
ttacatcagcaactagctgaaattattcataaggtgtcgatggcgcaggttttacctgct
agccaatcagatgaaactattcaaatgttggctgagcaattagatgctcagttattgcag
ttgctttatcaaatagtgattacaggcaaacgtgattttgcttatgcgcctaatcccaga
gtcggctttgaaatgaccgtattaaggatgttggcttttcaaccggttagcgcagaaacg
gcgctggttggtgaaccatcgataaacgcatcgccctctaatgcggagcttgaagatagt
agcttggtcaaggagcagcaagagatattagagcaggccactcaacaaggctatcagttg
cagccccaacctgcgcaaacaactcatgaaactcctcttgtagaacaagataaagccgaa
cgggaaaaccaaagagaacaaagtattgctaagttgaaaactcagcttagagcagatgat
aagcaatcatcgccagacaaacgggtacaaagtaaaccgattgttgatgcacctaaagtc
gagcctcacaccacgccagtcgaagctgtgttacccgccgcttcaataccggctagctct
gctaatagcgagcagtcaatcactcagacaagtgaactcaatgagcagctgccgccagtt
gatgatagttattatgctcaattagccgacagagatgatgagcaagcagagcatgatccc
acttactctgtagactatatgcccttggatgttgaaagtgcttcagcccctgccgcttca
gtcgcacctgagcaggctacgccgattgaagatactgcgtcgttattgcaattgcgtagt
cagcttagagggcggggcaaatccgaaaaaaagtctgaaggggcgcaagcctcactaaat
attgatcgattagcgacttcgacgtcgcaagcgaatatagccgatggtgttggccattct
attgaagagccactgcaagccgcagaaaagccaagttttcaagcgcaagctagtgatgaa
aatgaacgttgggcagaaatggtaaattatatggagttaggccctattgctcgccagatt
gcgatcaattccctttatagttttgatgggactaacgtcggcttattactaaagccagac
ttatcccatctacctaaaccaagttccctgacagagctaaaacaacaactttcagtttgc
ttaaaaaccgaggttgaattgcggattgaagtcggtgaagacttagcacaaaagacgcct
ttagagttacaacagctgcttcatattaagaataccgaagcagccgttcaacgtttactc
ggcgatcagaatatacagatccttcagcaacagtttggggctgaattagacaaagaaagc
gtgaaataccactga
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