Agarivorans sp. TSD2052: M0C34_14375
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Entry
M0C34_14375 CDS
T08089
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
agz
Agarivorans sp. TSD2052
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agz03016
]
M0C34_14375
Enzymes [BR:
agz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
M0C34_14375
Transfer RNA biogenesis [BR:
agz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M0C34_14375
Prokaryotic type
M0C34_14375
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
UPW17415
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All DBs
Position
complement(3176475..3177530)
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AA seq
351 aa
AA seq
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MSDYSTIISELNYLHGKPCCTGELKQQAVDFRVDEVLPFEFSGDGEHMMVKIEKTGENTA
WVAKMLAEACEASPKVVSYAGLKDRHAVTTQWFSIQLPGKANIQLAENLGEGVKVIATAR
HNRKLKRGALSGNHFVIRLRNVSDIEQALQRAEHVANEGVPNYFGSQRFGRGASNIDNAL
AMFAGRRVKSREKRSMYLSAARSLVFNQAISQRIEQQLFKQVLDGDVMKFATSNAYFVAE
QADQAILERFEQAEIELSAPMVGKGELACLDKALAFETSVLASYPEIVSGLSEAGLKMER
RALALKPQQFSYHADANDLVLSFFLTAGNYATSILREIVNCEGESNDHISE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactattcaacaatcatctctgagctgaattatttgcacggtaaaccctgttgc
acaggggagttaaagcaacaggcggtcgactttcgagttgatgaagtgttgccgtttgaa
tttagcggtgacggtgaacacatgatggtgaaaattgaaaaaaccggcgagaacaccgct
tgggtcgcaaaaatgttggctgaagcctgcgaagcgagtccaaaggtggtgagttatgcg
ggtttaaaagatcgccacgcggttaccacccaatggtttagcattcagttaccagggaag
gctaatattcagttagccgaaaatttgggtgaaggggtaaaagtaatcgctactgctcgg
cataaccgaaaactaaaacgtggcgccttatcgggtaatcattttgttattcgccttcgt
aatgtatctgatattgagcaagctttacagcgagctgagcacgtagccaacgaaggtgtc
cccaactattttggttcacaacgttttggtcgcggtgctagcaacatagataacgcgtta
gctatgtttgcaggcagacgtgttaaaagtcgagaaaagcgcagcatgtatttgtcagca
gctcgtagcttggtgtttaaccaagccattagtcagcggatagagcagcagttgtttaag
caggtgcttgatggtgatgtgatgaagtttgctactagtaatgcctattttgtggcagag
caagctgaccaagccattctagaacgttttgaacaagcagaaattgaattatcagctcca
atggtcggtaagggcgagttggcctgcctagataaggcattggcatttgaaacatctgtg
ttggcaagctatccggagattgtcagcggattgtccgaggcgggactgaaaatggagcgt
cgtgctttagcacttaagccacagcaatttagctatcatgccgacgcgaacgacctcgtg
cttagcttctttttaacggcgggtaactacgccaccagtattctacgcgaaattgtaaat
tgtgaaggcgaaagtaatgaccatattagtgagtaa
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