Agarivorans sp. TSD2052: M0C34_14440
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Entry
M0C34_14440 CDS
T08089
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M0C34_14440 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agz03400
]
M0C34_14440 (recO)
DNA repair and recombination proteins [BR:
agz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M0C34_14440 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M0C34_14440 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
UPW17428
LinkDB
All DBs
Position
complement(3191131..3191835)
Genome browser
AA seq
234 aa
AA seq
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MSAQPMTPAFVIHTRPYRETSLLVQLFTFEAGKVSVVARGARAKRSRLKGILQPGVPLLV
ELSGKGSLLNLKQAEASSLAFPLFGEHLYSALYLNELLYHLLDENTAYPCLYQKYQQSLV
ALAKQQPLEVCLREFELSLLTELGFALSEPERLAEGQHYQYRLDQGFISSAQLANASFSR
EDILMLLSFDETNAAHLVCAKRFCRIAIAQLLNGRELTSRALFKQIKVTNRTVK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgctcagccgatgactccggcttttgttatccatacgcgtccatatcgcgaaacc
agcttattggttcagttgtttacctttgaagctggcaaggtgagtgtggtcgccagaggg
gcaagagccaagcgctcccgcttgaaaggcattttgcaacccggtgttccgctgctggtt
gagctttcagggaaagggtcattgcttaacctaaaacaagctgaagcgagtagtttagct
tttcctttgtttggcgagcatttgtatagtgccttgtaccttaatgagttgctataccat
ttgttagacgagaatactgcctatccttgcttgtaccagaaataccaacaaagtctagtc
gcgctagccaagcagcaacccttagaggtctgtttgcgagagtttgagttaagtctatta
actgaactagggtttgccttaagtgaaccagagaggcttgctgaaggccaacattatcag
tatcgtttagatcaaggttttataagctctgctcagttggctaatgctagttttagtcga
gaagatattttgatgctgttaagttttgatgaaaccaacgcagcacacttagtatgcgcc
aaacgattctgtagaattgccattgctcaattgttaaatggtagagagttaacgagtcgc
gcattatttaaacaaattaaagttaccaatagaacggttaaataa
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