Agarivorans sp. TSD2052: M0C34_15205
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Entry
M0C34_15205 CDS
T08089
Name
(GenBank) L,D-transpeptidase family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
M0C34_15205
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
agz01002
]
M0C34_15205
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
agz01011
]
M0C34_15205
Peptidases and inhibitors [BR:
agz01002
]
Cysteine peptidases
Family C82
M0C34_15205
Peptidoglycan biosynthesis and degradation proteins [BR:
agz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
M0C34_15205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
LysM3_LYK4_5
AmiA-like
Motif
Other DBs
NCBI-ProteinID:
UPW17576
LinkDB
All DBs
Position
complement(3348017..3348928)
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AA seq
303 aa
AA seq
DB search
MKRLFVACFVLCLSWSVSALTYDLPAEGNRLMGGNQWHIVRKGETIAHIAERYEVGFLAV
MAANKGVDPFLPEAGTELLIPTQILLPDVERKGVVVNLAELRLYYFRPDTNVVDVFPIGI
GRIGRETPEMSTHISQKREQPTWTPTQNIRNEYLAKGITLPAVVQAGPENPLGEYALRLA
YGNGEYLIHGTNKEFGVGLRVSSGCIRLFPHDIEYLFSQVNVRTPVRIIDQSIKHSTETN
GEYLLEVHQPLNRSQEDISQATSLKLSRDDIKFITQAGIDSSVVNQALKNQQGIALAVGE
KQG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagattgtttgttgcctgtttcgtcttatgtttgtcatggtcggtttctgcatta
acttacgatttacccgctgagggtaatcgcttaatggggggtaaccaatggcatatcgtg
cgcaaaggagagactattgcgcatatcgctgaacgttatgaagtgggctttttggcagtg
atggcagccaacaaaggcgtcgaccctttcttgcctgaagcaggtaccgaattactgata
cctacgcaaatcttattacccgatgttgagcgtaaaggggtagtggttaacttagccgaa
ctgcgtctgtattactttcgccctgatactaatgtcgttgatgtatttccgatcgggatt
ggtcgtataggccgtgaaacccctgaaatgagcacgcatataagccaaaaaagagagcaa
cccacctggacgcccactcagaatattcgtaatgaatacctagctaaaggcattactttg
ccggcggtggttcaagcgggtccagaaaatcccttaggtgaatatgcgcttcgtttggct
tatggcaatggcgagtacttgatacacggtacaaacaaagagtttggggtagggttacgg
gtaagttctggttgtattcgtttgtttccgcatgatattgaatacttgttttctcaggtc
aatgtgcgaacaccggtgcgaattattgatcaatccatcaaacactcaaccgaaacgaat
ggtgaatacctattagaagttcatcagcctttaaaccgttcacaagaagatatttcgcaa
gcgacgtcgctaaaactaagtcgtgatgatattaagtttattacccaagcgggaattgat
tcgtcagtggtaaatcaagccttgaaaaatcagcagggtattgcattggctgtgggtgaa
aagcagggataa
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