Agarivorans sp. TSD2052: M0C34_16705
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Entry
M0C34_16705 CDS
T08089
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
agz
Agarivorans sp. TSD2052
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agz03400
]
M0C34_16705 (radA)
DNA repair and recombination proteins [BR:
agz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M0C34_16705 (radA)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
ABC_tran
Rad51
RecA
AAA_22
GvpD_P-loop
AAA_14
DUF7125
SLFN-g3_helicase
Zeta_toxin
AAA_16
nSTAND3
AAA_29
AAA_24
PAXNEB
NTPase_1
Zn_ribbon_Thio2
Motif
Other DBs
NCBI-ProteinID:
UPW17857
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Position
complement(3671538..3672899)
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AA seq
453 aa
AA seq
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MAKVKTAYVCNDCGADFPRWQGQCGECKAWNTVSEVRLSAAPARNDRFSGYAGTNVGKVQ
TLDSIDLAELPRFSTGFKEFDRVLGGGVVPGSAILIGGSPGAGKSTLLLQTMCGLAQTMD
TLYVTGEESLQQIALRAQRLGLPKDKLKLLAETSVEQIGQVALEVKPKMMVIDSIQVMHM
ADIQSAPGGVSQVRESAAWLTRFAKQHNIAMFMVGHVTKDGSLAGPKVLEHCIDCSIMLE
GDADGRFRTLRGNKNRFGAINELGVFAMTEQGMREVSNPSAIFLSRGQEAAPGSVVMVVW
EGTRPLLVEIQALVDYSQMANPRRIAVGLEQNRLAMLLAVMHRHAGVQMSDQDVFTNVVG
GVRVAETGADLALLVAMISSFRNQILPQELVVFGEVGLSGEIRPVSNGQERLNEAAKHGF
KRAIVPSGNRPKQPIAGLEVIAVGKLAEALEAV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtgaaaacggcttatgtttgtaatgattgtggagccgattttccgcgttgg
caagggcaatgcggcgagtgtaaagcttggaatactgttagcgaagtgcgcttaagtgct
gcgcccgcacggaatgaccgttttagcggttatgccggcaccaatgtgggtaaagtgcaa
accttagacagtattgatcttgccgagttacctcgattttctaccggttttaaagaattt
gaccgggtgcttggtggtggggtcgtgccgggaagcgccattttaattggtggtagccct
ggagcgggtaaaagtaccttgctactgcaaaccatgtgtggtctggcccaaaccatggac
actttgtatgtcactggtgaagaatctttacagcaaatagcgctgcgtgcacagcgtttg
ggcttacccaaagacaagcttaagctgctcgccgaaaccagtgttgaacaaattggccaa
gtcgcgttggaagttaaacccaaaatgatggtgatagactccattcaggtaatgcatatg
gcggatattcaatcagcccctggtggggtaagccaagtgcgtgaaagtgccgcatggtta
acccgttttgccaagcagcacaatatcgcgatgtttatggtgggtcatgtgactaaagat
ggatcattggctggtcctaaagttctcgaacactgcattgattgctctatcatgttagaa
ggtgatgccgatgggcgctttcgtaccttgcgtggaaacaaaaaccgttttggtgcgatt
aacgaattgggtgtctttgccatgacagagcaaggtatgcgtgaagtgtccaacccttca
gctatcttcttatcacgaggccaagaagcggcgcctggctcggtggtaatggttgtgtgg
gaaggtactcgcccgctcttagtggagatacaagccttggtcgattacagtcaaatggct
aacccgcgacggattgcggttggtttagagcaaaatcgcttggcgatgctgctggcggtg
atgcatcgccatgccggtgtgcagatgtctgatcaagacgtgtttaccaacgtcgtgggc
ggtgtacgggtggctgagacgggcgccgacttagccttgctggttgcgatgatctcgagt
tttcgcaatcaaatattaccgcaagaattagtggtatttggtgaagtgggtttatcggga
gagattcgcccagtgagcaatggtcaagagcgcttaaatgaagccgctaaacacggcttt
aaacgtgctattgtcccctcgggcaatcggcctaagcagccaattgctggattagaggtc
atcgctgtgggtaaactagctgaagccttagaggcggtttaa
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