Agarivorans sp. TSD2052: M0C34_17160
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Entry
M0C34_17160 CDS
T08089
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz00470
D-Amino acid metabolism
agz00550
Peptidoglycan biosynthesis
agz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M0C34_17160 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M0C34_17160 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
agz01011
]
M0C34_17160 (murD)
Enzymes [BR:
agz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
M0C34_17160 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
agz01011
]
Precursor biosynthesis
Amino acid ligase
M0C34_17160 (murD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
MurD_N
Pro_dh
Motif
Other DBs
NCBI-ProteinID:
UPW17943
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Position
complement(3777351..3778655)
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AA seq
434 aa
AA seq
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MSKLQPQKRYAVVGLGASGMSSVRFLLSQGISPLICDTRISPPGLTQLADNLTVVCGELP
LLQLLDCDVVIVSPGVALAHPVLQKIAEAGVSLIGDVELFCHYALAPIVAITGSNGKSTV
TSLVGDMAKQAGINVAVGGNIGVPVLDLLADDVQLYVLELSSFQLETTDSLAACAATVLN
ISEDHMDRYQGLADYIAAKQKIYQHATTAIVNLDDADSQPHVNAKQVISFSLTSAGDYSL
SDNQQQLMKGERVLLATEELPLVGTHNYANILAALALADAAGIALEACLIAIKQFVGLAH
RCQLVSRKRGISWINDSKATNVGATIAALKGLVQARQQLWLIVGGDSKDGDLSELAGPLA
AVAGVVAFGKDKQRFKDIAANTLLVDNLEQALTWCKQQAKSGDTVLLSPACASLDMYRNF
ENRGQHFCQLVEAL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaattgcagccacaaaaacgttacgcagtcgttggtcttggagccagcgggatg
agtagtgtgcgctttttacttagccaaggcatctctcctttaatttgtgatacccgtatt
tcccctccaggcttgacacaactagcagacaatttgacggtggtttgtggtgagctgcct
ttacttcaattactcgactgtgatgtggtgattgttagtccaggggtagcgctggctcac
cctgtattgcaaaaaattgccgaggccggcgtatcgttgattggtgacgtagagttattt
tgtcactatgcgctggctccgatagtcgcgattaccggttctaatggtaaaagcaccgtc
accagtttagtgggagacatggccaagcaagccggcattaacgtggcggttggcggtaat
attggggttcccgtactcgatttattggctgacgatgtgcaactgtatgtcctcgagtta
tccagctttcaactggaaacgacggattctctcgcagcttgtgcagcaacggtgctaaat
attagcgaagaccatatggatcgctatcaaggtttagcagactacatcgccgctaaacag
aaaatataccagcacgctacaaccgccattgttaatttggatgatgccgactcgcaacct
catgttaatgccaagcaagtcatcagcttctcgttgacctcagcgggagattacagccta
agtgataatcagcagcaattgatgaagggcgagcgagtgttacttgctaccgaagagctt
cctttagtgggtacgcacaactatgcaaacattttggcagccttagcgctagcagacgca
gcgggcattgcacttgaggcctgcttaatcgctatcaaacaatttgttggtttagcgcat
cgttgccaactggtctcgcgtaagcgaggcattagttggattaacgattctaaagcgacc
aacgtaggggctaccattgccgcgcttaaaggcctagttcaagctcggcagcagttatgg
ttgattgtaggcggtgacagtaaagatggcgatttaagcgagttagcagggccgctggca
gctgtcgctggcgtggtggcctttggtaaagacaaacaacgctttaaagatattgcggcc
aatactctgttggtcgacaaccttgaacaagcgctcacttggtgtaagcaacaggctaaa
agcggagatacggtgttgctgtcacccgcttgcgctagcttagatatgtaccgtaacttt
gaaaatcgtgggcagcatttttgtcagttggtggaggcgctatga
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