Agarivorans sp. TSD2052: M0C34_17780
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Entry
M0C34_17780 CDS
T08089
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
M0C34_17780 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agz03019
]
M0C34_17780 (orn)
03009 Ribosome biogenesis [BR:
agz03009
]
M0C34_17780 (orn)
Messenger RNA biogenesis [BR:
agz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M0C34_17780 (orn)
Ribosome biogenesis [BR:
agz03009
]
Eukaryotic type
Pre-60S particles
RNases
M0C34_17780 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UPW18053
LinkDB
All DBs
Position
complement(3897110..3897664)
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AA seq
184 aa
AA seq
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MTISENNLVWVDMEMTGLEPISDRVLEIATIITDGQLNILAEGPVIAVHQSDDILSGMDE
WCTNTHTGSGLVARVRASTVNEQQASEDTMAFISQWVPKGVSPMCGNSIGQDRRFMHQYL
PELEKYFHYRNIDVSTVKELARRWQPEILNGFSKTGTHLALDDIRESIAEMQHYQKTFFK
LGEN
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgactattagcgaaaataatctagtttgggtagatatggagatgactggtctcgagccc
attagtgatcgagttctagaaatagcgaccattattactgatggccagttaaatattttg
gccgaggggccggtgattgcggttcatcaatctgacgacatactttcaggtatggatgag
tggtgcactaatactcatactgggtctggactggttgcgcgagtgcgggcgagcactgtt
aacgagcaacaggcatctgaagatacgatggcgtttattagtcaatgggtgccaaaaggt
gtatcacctatgtgcggtaacagtattggtcaagaccgtcgattcatgcatcagtattta
cctgagttagagaagtattttcattatcgtaatattgatgtcagtacggtaaaagaatta
gcacgtcgctggcagcctgaaattttaaatggctttagtaaaacaggaacccatttagct
ctggatgacatacgagaatcgattgcagaaatgcagcattaccaaaaaaccttcttcaag
ctgggcgaaaactag
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