Agarivorans sp. TSD2052: M0C34_17980
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Entry
M0C34_17980 CDS
T08089
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M0C34_17980 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agz03019
]
M0C34_17980 (groL)
03110 Chaperones and folding catalysts [BR:
agz03110
]
M0C34_17980 (groL)
03029 Mitochondrial biogenesis [BR:
agz03029
]
M0C34_17980 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agz04147
]
M0C34_17980 (groL)
Enzymes [BR:
agz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
M0C34_17980 (groL)
Messenger RNA biogenesis [BR:
agz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
M0C34_17980 (groL)
Chaperones and folding catalysts [BR:
agz03110
]
Heat shock proteins
HSP60 / Chaperonin
M0C34_17980 (groL)
Mitochondrial biogenesis [BR:
agz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
M0C34_17980 (groL)
Exosome [BR:
agz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
M0C34_17980 (groL)
Exosomal proteins of other body fluids (saliva and urine)
M0C34_17980 (groL)
Exosomal proteins of breast cancer cells
M0C34_17980 (groL)
Exosomal proteins of colorectal cancer cells
M0C34_17980 (groL)
Exosomal proteins of bladder cancer cells
M0C34_17980 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
REF
Motif
Other DBs
NCBI-ProteinID:
UPW18090
LinkDB
All DBs
Position
complement(3944901..3946559)
Genome browser
AA seq
552 aa
AA seq
DB search
MAAKDVLFGNDSRGKMLAGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEI
ELEDKFENMGAQMVKEVASQANEAAGDGTTTATVLAQAIVSEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKGLSAPCADTTAIAQVGTISANSDATVGNIIAEAMEKVGKEGVITVEEG
QALTDELDVVEGMQFDRGYLSPYFINNQENGTVELDNPFILLADKKISNIRELLPLLEAL
AKAGKPLLIVAEDVEGEALATLVVNNMRGIVKVSAVKAPGFGDRRKAMLQDIAILTNGTV
ISEEVGLELEKATLEDLGTAKRVVISKDNTTIIDGVGEEAAIQGRVTQIRQQIEDTSSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALNATRAAVEEGVVAGGGVALV
RAAAKVTELQGDNEDQNVGIRVALRAMEAPLRQIVTNAGEEASVVANKVKEGTGSFGYNA
GTGVYGDMLEMGILDPTKVTRSALQFAGSVAGLMITTECMITDKPEDKAAGGAPDMGGMG
GMGGMGGMGGMM
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtattatttggtaatgattctcgcggcaaaatgttagccggcgta
aatgttctagcagacgcagtaaaagtaacgctgggccctaaaggccgcaatgtagtgcta
gacaaatctttcggcgcaccgactatcactaaagatggtgtatctgtggcgaaagaaatt
gaacttgaagacaagtttgaaaacatgggcgcgcaaatggtgaaagaagttgcttctcaa
gccaacgaagccgccggtgacggaacaactaccgcaactgtattggctcaagccattgta
agcgaaggccttaaggcagtagctgcaggcatgaacccaatggatcttaagcgcggtatc
gacaaagcggtaatcgcagcagtagaagaacttaaaggtttgtctgcaccgtgtgctgac
actacagccattgctcaagtaggtactatttctgctaactctgatgccaccgtgggtaac
atcattgcagaagcaatggaaaaagtaggcaaagaaggcgtaattactgttgaagaaggc
caagcgctaactgatgagttagacgtagttgaaggtatgcagtttgatcgcggttaccta
tctccttacttcatcaacaaccaagagaatggcacggttgaattagacaacccattcatt
ttattggcggacaaaaaaatctctaacatccgtgaactacttcctttgctagaagcgcta
gctaaagcaggtaagcctttgctaattgttgctgaagatgttgaaggcgaagccttagca
acattggtagtaaacaacatgcgcggtattgttaaagtatctgcagttaaagcgcctggt
tttggcgaccgtcgtaaagccatgttacaagacattgctattctaacgaacggcactgtt
atctctgaagaagttggcctagagctagaaaaagcgactttagaagatttgggtactgct
aagcgtgttgttatttctaaagacaacaccaccatcattgatggcgtgggtgaagaagct
gcgattcaaggtcgcgtaacgcaaattcgtcaacaaatcgaagatacctcttctgattat
gacaaagaaaaacttcaagagcgcgtagctaaactagctggcggtgtagcggtgattaaa
gttggcgctgcaactgaagttgaaatgaaagagaagaaagaccgcgtagaagatgcacta
aacgcaactcgcgccgcggttgaagaaggcgtagtggccggtggtggtgttgcactagta
cgagcagccgctaaagtgactgagctacaaggtgataacgaagaccaaaacgtaggtatt
cgcgtagcccttcgcgctatggaagctccgcttcgccaaatcgtaactaacgcaggcgaa
gaagcctctgtggttgctaacaaggtgaaagaaggtactggtagctttggttacaatgct
ggcactggtgtatacggtgacatgctagagatgggtattcttgacccaactaaagtaacc
cgttcagcgcttcagtttgctggctcggtagctggtttgatgatcacgactgaatgtatg
atcactgataagcctgaagataaagctgctggtggcgcccctgatatgggcggtatgggc
ggtatgggtggtatgggtggcatgggcggcatgatgtaa
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