Agarivorans sediminis: M0C34_18125
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Entry
M0C34_18125 CDS
T08089
Symbol
fis
Name
(GenBank) DNA-binding transcriptional regulator Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
agz
Agarivorans sediminis
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agz03000
]
M0C34_18125 (fis)
03036 Chromosome and associated proteins [BR:
agz03036
]
M0C34_18125 (fis)
03400 DNA repair and recombination proteins [BR:
agz03400
]
M0C34_18125 (fis)
Transcription factors [BR:
agz03000
]
Prokaryotic type
Helix-turn-helix
Other families
M0C34_18125 (fis)
Chromosome and associated proteins [BR:
agz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
M0C34_18125 (fis)
DNA repair and recombination proteins [BR:
agz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
M0C34_18125 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis_N
HTH_8
Phage_TAC_12
Baseplate_J_C
TetR_C_16
DCAF17
Motif
Other DBs
NCBI-ProteinID:
UPW18119
LinkDB
All DBs
Position
3979697..3979996
Genome browser
AA seq
99 aa
AA seq
DB search
MFDSNTTTNTLSTMTSSATSTEVKERPLRDSVEQALRNYFAQLNGEDVTELYELVLSEVE
APLLDVVMQYTRGNQTRASIMLGINRGTLRKKLKKYGMN
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattcaaataccaccacaaacacactttctactatgactagcagtgctactagt
actgaagtgaaagaacgtccattacgcgattctgttgagcaagcattgcgcaactacttc
gcccagttaaatggcgaagatgtgacagaactgtacgaattagtactatctgaagttgaa
gctccgttgcttgacgtagttatgcaatacactcgtggtaaccaaacacgtgcttcaatc
atgttaggtatcaaccgtggtactttacgcaagaagttaaaaaaatacggcatgaactaa
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