Agarivorans sp. TSD2052: M0C34_19540
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Entry
M0C34_19540 CDS
T08089
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz00730
Thiamine metabolism
agz01100
Metabolic pathways
agz01240
Biosynthesis of cofactors
Module
agz_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
M0C34_19540 (thiC)
Enzymes [BR:
agz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
M0C34_19540 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UPW18391
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Position
complement(4269261..4271198)
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AA seq
645 aa
AA seq
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MSRRETRAAAEQYINNLQGQPFPNSEKIYVQGSRDDIQVAMRQINLADSLVGGTKDEPKL
EPNEPVRVYDTSGIYTDEHAELDVHKGLPQLRKAWIEERGDTEELTGLSSNFSQQRLADE
GLDHIRFESLPTPRKAKLGKTVTQLHYARQGIVTPEMEYIAIRENMGRDKIREDLLAEQQ
KGHSFGASLPEHITGEFVRDEVARGRAIIPANINHAEAEPMIIGRNFLVKVNANIGNSAV
TSSIEEEVEKLVWASRWGADTVMDLSTGRYIHETREWVIRNSPVPIGTVPIYQALEKVNG
VAEDLNWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLA
HHTESFLYERFRDICEICAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELTKVAWE
YDVQVIIEGPGHVPMQMIKENMEKQLEECHEAPFYTLGPLITDISPGYDHFSSGIGAAMI
GWFGCAMLCYVTPKEHLGLPNKDDVKQGMIAYKIAAHAADLAKGHTGAQIRDNAMSKARF
EFRWEDQFNLALDPDTARAYHDETLPQDSAKVAHFCSMCGPKFCSMKISQEVRDYAKDLE
IKMIDEPLADLGFVAEGMAEKSAEFRDKGAEIYHSPLRAETSDEV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacgcgaaaccagagctgcagcagagcaatacattaataatctgcaaggccaa
ccttttccaaattcagaaaaaatctatgttcagggaagtcgagacgacatccaagtggcg
atgcgccaaattaacctggctgacagtttagtcggcggcactaaagatgaaccaaagtta
gagcctaacgaacctgtacgcgtttacgatacctcgggcatttataccgacgaacatgct
gaactagatgttcataaaggcctgccacaactgcgtaaagcgtggattgaagagcgtggc
gataccgaagaattaaccgggcttagctctaacttttcgcagcagcgtttagctgatgaa
ggcttagaccatattcgctttgaaagtttacctactcctcgaaaagctaaacttggcaaa
accgttacccaactgcactatgctcgccaaggtattgttacaccagaaatggaatacatc
gcgatccgtgaaaacatggggcgggataaaattcgtgaagacttgttggccgagcagcaa
aaaggtcattcctttggcgcttcactgccagaacatattaccggtgaatttgtgcgtgat
gaagtggcccgtggtcgcgctattatccctgccaatattaaccacgccgaagcagagcca
atgatcattggtcgtaacttcttggtgaaagtaaatgccaatatcggtaattcggcagtg
acttcatcgattgaagaagaagttgaaaagctagtatgggccagccgttggggcgccgat
acggtgatggatttgtctaccggtcgttatattcacgaaacccgcgagtgggtgattcgt
aactcacctgtgccgattggcaccgtacctatttatcaagccttagaaaaggtaaacggc
gtagctgaagaccttaattgggaagtcttccgcgataccttgattgaacaagccgagcaa
ggtgttgattactttactattcacgccggtgtattactgcgttatgtgcctatgaccgct
aaacgggtgacgggtattgtgtcgcgtggtggttcgattatggcgaagtggtgtttagct
caccacactgaaagctttttgtatgaacgttttcgcgatatttgtgaaatttgtgccgct
tacgatgtatcactgtcgttaggtgatggcatgcgtccgggttctattgctgacgctaac
gatgaagcccaatttgctgagctagaaaccttgggtgagctcaccaaagtggcttgggaa
tatgatgtacaagtgatcattgaaggcccaggtcatgtgccaatgcagatgattaaagag
aacatggagaagcagttagaagagtgtcacgaagcaccattctacacgcttggcccattg
atcactgacatttcacctggctacgaccacttctcatcgggtattggtgccgcgatgatc
ggttggtttggttgtgcgatgttgtgttatgtcacacctaaagagcacttaggtttaccg
aataaagacgatgtgaagcaaggcatgattgcatacaaaatagcggcgcacgcagctgat
ttagcaaaaggacatactggcgcacagatccgcgataacgccatgagtaaggcgcgattt
gagttccgttgggaagatcaattcaacctagccttagaccctgatacagcgcgcgcttat
catgacgaaaccttaccgcaagattctgccaaggtggctcacttttgctcaatgtgtgga
cctaaattctgttcaatgaaaatctcgcaagaagtgcgtgactatgccaaagatttagaa
atcaaaatgattgatgaacctttggctgacttaggttttgttgccgaaggcatggccgaa
aaatctgcagagtttagagacaaaggggccgagatttaccattcgccactgcgtgctgag
accagcgatgaagtctaa
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