Agarivorans sp. TSD2052: M0C34_20120
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Entry
M0C34_20120 CDS
T08089
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz00300
Lysine biosynthesis
agz00470
D-Amino acid metabolism
agz01100
Metabolic pathways
agz01110
Biosynthesis of secondary metabolites
agz01120
Microbial metabolism in diverse environments
agz01230
Biosynthesis of amino acids
Module
agz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M0C34_20120 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M0C34_20120 (lysA)
Enzymes [BR:
agz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
M0C34_20120 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UPW18496
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Position
complement(4393712..4394965)
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AA seq
417 aa
AA seq
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MDFFSYQNEQLNAEQCSVADLASTYGTPLYVYSRATIERHWQAFDKAAGKRPHMICYAVK
ANSNLAVLNVMARMGSGFDIVSGGELARVIKAGGDPAKVVFSGVGKTEQEITDALNHGIY
CFNVESEPELDRISKVAQGLGKVAPISLRINPDIDAGTHPYISTGLKENKFGIAIEKAAA
AYAYAADLPSLNVVGLDCHIGSQLTEISPFVEAIDKLLALIDQLAEQGIVIEHLDVGGGL
GVNYDDETPPEPADYASALAERLGDRKLKLLFEPGRAIMANAGILVSKVEFLKMSDSKNF
AIVDAAMNDLLRPSLYSAWQRIVPVIKRPELIATSYDVVGPICETGDFLGKDRELAIEAG
DYIAVRSSGAYGFTMSSNYNSRCRAAEVMVDGDSAHIVREREVLESLWAGETLLPKG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggatttctttagttatcaaaacgagcaattaaacgcagaacaatgctcggtagctgac
ttagccagcacttacggtacacctttgtacgtatattcacgcgccacgattgagcgtcat
tggcaagcctttgacaaagcggcgggtaaacgtccacacatgatctgttacgcagtaaag
gctaattcaaacttagcggtacttaatgtgatggcgcgaatgggctctggctttgatatt
gtatctggtggtgaactggcaagagtcataaaggcggggggtgatcctgctaaagtggtc
ttttcaggtgtgggtaaaaccgagcaagaaattaccgatgcgctcaatcacggtatctac
tgttttaacgtagaatctgagcctgagctagatcgaatcagtaaagtggctcaaggttta
ggcaaagtagcgcctatttcattacgtattaacccagatattgatgctggcacacaccct
tatatctctaccggattaaaagaaaacaaatttggtatcgcgattgaaaaagctgccgcc
gcctatgcttatgccgcggatttaccgtcgttgaatgtcgtaggtctagattgccatatt
ggctcgcagctaaccgaaatatcgccctttgtcgaagctatcgataaattactggcttta
atcgaccagcttgccgagcagggcattgtgattgagcaccttgatgtcggtgggggctta
ggcgttaattacgacgatgaaaccccacccgagcctgcagattatgctagcgctctagct
gaacgcttaggtgaccgaaaattaaagctactgtttgaacctggccgtgccattatggcc
aatgcgggtattttagtgtctaaagttgaattcttaaaaatgtcagacagtaaaaatttt
gccattgttgatgctgcgatgaacgatttgttgcgtccgtctttatatagcgcttggcaa
cgtattgtgccagtgattaagcgtcctgaacttatcgcgactagctatgatgtggtgggg
cctatttgtgagactggcgatttcttaggtaaagaccgcgaattagccattgaagcgggc
gactatatcgcagtgcgctcatctggcgcgtatggctttaccatgagctcaaattataac
tctcgttgtcgagcagccgaagtgatggttgacggtgatagcgcgcatattgtgcgtgag
cgtgaagtcctcgagtctctttgggccggcgaaacgctgttgcctaaaggataa
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