Agarivorans sp. TSD2052: M0C34_20420
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Entry
M0C34_20420 CDS
T08089
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
agz
Agarivorans sp. TSD2052
Pathway
agz00541
Biosynthesis of various nucleotide sugars
agz01100
Metabolic pathways
agz01250
Biosynthesis of nucleotide sugars
Module
agz_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
M0C34_20420 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
agz01005
]
M0C34_20420 (rfaD)
Enzymes [BR:
agz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
M0C34_20420 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
agz01005
]
Core region
M0C34_20420 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
UPW18550
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Position
4457697..4458653
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AA seq
318 aa
AA seq
DB search
MIIVTGGAGFIGANIVKSLNEQGHNDIIVVDDLKDGTKFVNLVDLDIADYLDKDDFIARI
VSGEDIGAEYGQKIEAIFHEGACSATTEWDGKYMMENNYEYSKELLHYCLDRRIPFLYAS
SAATYGDTDTFIEEKQYEGPLNVYGYSKLQFDNYVRRLLPDIDSQVVGFRYFNVYGPREQ
HKGSMASVAFHLNNQVNDDQNPKLFEGYDGYGNGGQSRDFVYVGDVVKVNLWFWKNPDQS
GIFNLGTGQAEPFRSVAEAVINHHQKGEIEYIPFPDHLKGRYQSFTQANIDKLRAAGYAE
PFKDVAQGVAEYMAWLNK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaacaggcggggcgggctttattggcgccaatattgtaaagagcttaaat
gagcaaggtcataacgacatcatcgtggtcgacgacctaaaagacggcactaaattcgtt
aatctagtcgatttagacattgccgactatctcgacaaagacgacttcattgcccgcatt
gtatccggtgaagacatcggcgctgaatacggtcaaaaaatcgaagccattttccatgaa
ggcgcatgctctgctaccactgagtgggatggcaaatacatgatggaaaacaattatgaa
tactcaaaagaattacttcattactgtttagaccgccgcattcctttcttgtacgcctct
tctgcggccacctatggtgataccgatacttttatcgaagagaaacaatacgaaggccca
ctgaatgtttacggttattcaaagctgcaatttgataactacgtgcgccgcttattgcca
gacattgactcgcaagtcgttggcttccgttacttcaacgtatacggtccccgtgaacaa
cacaaaggcagcatggcaagtgttgccttccacttgaataatcaagttaacgatgaccaa
aaccctaaactatttgaaggttacgacggttacggcaacggcggccaaagccgcgatttc
gtttacgtcggcgacgtagtcaaagtgaatctttggttctggaaaaaccccgatcaaagc
ggcatcttcaacctagggaccggccaagcagaaccattccgctctgtggctgaagcggtc
atcaatcatcaccaaaaaggtgaaattgaatatattcctttccctgatcatctgaaaggc
cgttaccaaagctttactcaagctaacatcgacaaacttcgcgcagcaggctacgccgaa
ccgtttaaagacgtcgcccaaggcgttgccgaatacatggcttggttgaataaatag
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