Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_0196
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Entry
AHA_0196 CDS
T00424
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Pathway
aha03030
DNA replication
aha03410
Base excision repair
aha03420
Nucleotide excision repair
aha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AHA_0196 (polA)
03410 Base excision repair
AHA_0196 (polA)
03420 Nucleotide excision repair
AHA_0196 (polA)
03440 Homologous recombination
AHA_0196 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aha03032
]
AHA_0196 (polA)
03400 DNA repair and recombination proteins [BR:
aha03400
]
AHA_0196 (polA)
Enzymes [BR:
aha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AHA_0196 (polA)
DNA replication proteins [BR:
aha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AHA_0196 (polA)
DNA repair and recombination proteins [BR:
aha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AHA_0196 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AHA_0196 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABK36807
UniProt:
A0KER4
LinkDB
All DBs
Position
211076..213829
Genome browser
AA seq
917 aa
AA seq
DB search
MAPSNPLILVDGSSYLYRAFFASQQADLRTSTGLPSGAVRVMANMMRSLRKQYPDCHVAV
VFDAKGKTFRDDIYPEYKANRASMPDDLRSQVAPIHQMIKAMGFPFLMVEGVEADDVIGT
LARQATEKQLPVLISTGDKDMAQLVSDHVTLIDTMKDVKTDREGVIEKFGVPPELIIDYL
ALMGDKVDNIPGMTGVGEKTALALLQGIGSIDEIAANLDKVAALGFRGSKAFADKFREQE
EQVRLSYVLATIKTDVALEQSLEELQLGPIDKEALLAVYREYELRNLIKELESGGAEESG
AEGDDEGAAPVAAIETDYRCILDEAEFDEWLARLQAAPLFAFDTETTSLDYMEARVVGVS
FAIEPGKAAYVPFGHDYLGAPVQLTEAVVLGKLKPLLEDPARLKVGQNLKYDRNVLLNHG
IELQGIAYDTMLESYVLNSTASRHDMDSLARRYLNAETISFEEIAGKGVKQLTFNQIELE
QAAPYAAEDADITLRLHQALWGKLSAEPGLAKVFSEIELPLLPVLARMERLGTTIEPKLL
HQQSQEIEVRLAELEKQAHELAGQEFNLSSPKQLGEILFTKLGLPIIKKTPKGAPSTAEE
VLAELAETYELPQLLMEHRGLAKLKSTYTDKLPLMIKPQTGRVHTSYHQAVAATGRLSST
DPNLQNIPVRNEQGRRIRQAFIPCAGYKLVAADYSQIELRIMAHLSGDKGLLTAFAEGKD
IHKATAAEVFGVALEAVTSDMRRSAKAINFGLIYGMSAFGLAKQLGIGRAEAQKYMDLYF
ERYPGVLEYMERTRQQADAQGYVETLFGRRLYLPDIKSRNAGLRKAAERAAINAPMQGTA
ADIIKRAMINVDGWIRGIEDQSIRMLMQVHDELVFEIREEKLEEYIAIIKEKMSAAAELD
VPLVVEAGTGDNWDQAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggcccctagcaatccccttattctggtcgacggctcttcatatctttaccgcgccttc
tttgcctcccagcaggccgatctgcgcacctcgaccggtttgccgagcggcgccgtccgt
gtcatggccaacatgatgcgcagcctgcgcaagcagtaccccgactgccacgtggccgtg
gtgttcgatgccaagggcaagaccttccgcgacgacatctatcccgaatacaaggccaac
cgggccagcatgccggacgatctgcgcagccaggttgcccccatccaccagatgatcaag
gcgatgggcttccccttcctgatggtggaaggggtggaggctgacgatgtgatcggcacc
ctggcccgccaggcgaccgagaagcagctgccggtgctgatcagcacgggcgacaaggac
atggcgcagctggtctccgaccatgtcactctgatcgacaccatgaaggacgtgaagacc
gatcgggaaggggtgatcgagaagttcggcgtaccgcccgagctcatcatcgactacctg
gccctgatgggggacaaggtggacaacatccccggcatgaccggcgtcggtgagaagacc
gcactggccctgctgcaggggatcggcagcatcgacgagatcgccgccaacctcgacaag
gtggcagcgctcggtttccgtggctccaaggcgttcgccgacaagttccgcgagcaggaa
gagcaggtgcgcctctcctacgtgctggccaccatcaagactgacgtggcgctggagcag
agtctggaagagttgcagctcggtcccatcgacaaggaggctctgctggcggtctatcgc
gagtacgagctgcgcaacctgatcaaagagctggaatccggcggcgcggaggagagcggc
gccgagggtgatgatgaaggcgccgccccggtagccgccatcgaaaccgactatcgctgc
atcctggatgaggccgaattcgatgaatggctggcccgtctgcaggcggcgccgctattt
gccttcgataccgagaccaccagtctcgactatatggaagcgcgcgtcgtgggcgtctcc
tttgccatcgagccgggcaaggcggcctacgtgcccttcggccacgactatctgggggcg
ccggtacagctgaccgaggccgtggtgctgggcaagctcaagccgctgctggaagatccg
gcccgccttaaggtggggcagaacctcaagtacgatcgcaacgtgctgctcaatcacggt
atcgagctgcagggcatcgcctatgacaccatgctcgagtcctatgtactcaactccacc
gccagtcgtcacgacatggattcgctggcccgcagatatctgaatgccgaaaccatctcg
ttcgaagagatcgccggcaagggggtcaagcagcttaccttcaaccagattgaactggag
caggcggctccttacgcggcggaagatgccgacatcaccctgcgtctgcatcaggcgctg
tggggcaagctctctgccgagccgggcctcgccaaggtgttcagcgagatcgaattgccg
ctgctgccggtgctggcacggatggagcgactcggtaccaccatcgagcccaagctgctg
catcagcagagccaggagatcgaagtgcgtctggcagagctggagaaacaggctcacgag
ctggccgggcaggagttcaatctctcctcgcccaagcagctgggggagatcctcttcacc
aagctggggctgccgatcatcaaaaagacccccaagggcgccccatccactgcggaagag
gtgttggccgagctggcggagacctatgagctgccgcaactgctgatggagcaccgtggg
ctggccaagctcaagtccacctacaccgacaagctgccgctgatgatcaaaccgcagacc
gggcgggtgcacacctcctatcatcaggcggtggcggcgaccggccggctctcgtccacc
gatcccaacctgcagaacatcccggtgcgcaacgaacaggggcgccgcatccggcaggct
ttcatcccgtgcgccggttacaagctggtggcggcggactactcccagatcgagctgcgc
atcatggcacacctctccggtgacaaggggttgctgaccgccttcgccgagggcaaggac
atccacaaggcgaccgccgccgaggtgttcggggtcgcgctcgaggcggtgaccagcgac
atgcgccgcagtgccaaggcgatcaactttggtctcatctatggcatgagtgccttcggt
ctggccaagcagctggggatcggtcgcgccgaagcgcagaagtacatggatctctacttc
gagcgctacccgggtgtgctggagtacatggagcgcacccgccagcaggcggatgctcag
ggctatgtcgaaaccctgtttggccgtcgcctctatctgccggatatcaagtcgcgcaac
gccggtttgcgcaaggcagccgaacgggccgccatcaacgcacccatgcaggggacggct
gccgacatcatcaagcgcgccatgatcaacgtggatggttggatccgcgggattgaagac
cagtcgatccgtatgctgatgcaggtacacgatgaactggtgttcgagatccgcgaagag
aagctggaggagtacatcgccatcatcaaggagaagatgtccgccgcagccgagctggat
gtgccgctggtagtggaagcgggtaccggtgacaactgggatcaggcccactga
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