Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_0220
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Entry
AHA_0220 CDS
T00424
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Pathway
aha03420
Nucleotide excision repair
aha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AHA_0220 (uvrD)
03430 Mismatch repair
AHA_0220 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aha03400
]
AHA_0220 (uvrD)
Enzymes [BR:
aha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AHA_0220 (uvrD)
DNA repair and recombination proteins [BR:
aha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AHA_0220 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AHA_0220 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ABK37514
UniProt:
A0KET2
LinkDB
All DBs
Position
241787..243958
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AA seq
723 aa
AA seq
DB search
MDVSTLLDGLNDKQRDAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVIGDGVRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVLKALNLDEKHWAPRAVMGYINGKKDEGLRPGDIDLYGDPVTRTYQQIYKTYQET
CDRSGLVDFAELLLRAHELWLNKPHILEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGDT
GKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANCVIANN
AERLGKELWTEGAEGEPISLYAAFNEVDEARFVVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGD
RTLEILRNNARDQGQNLWQSAKALLGDKVLTGRAGNAVRGFVDLIDALEEQVSLLPLHQQ
ADIAIQHSGLKAMYLAEKGEKSQARVENLDELVTACRQYQRPDELEDMSDLSAFLAHAAL
ESGENQADEYADAVQLMTLHSAKGLEFPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGIKLGQRVLHPKFGEGIVLNFEGVGQQSRVQIQFDDVGAKWLVTAYARL
ETL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcaaccctgctcgacgggctcaatgacaagcaaagagacgcggtggcggcc
ccccgttgcaacctgctggtgctggccggtgccggttcgggcaagacccgggtgctggtg
caccgtatcgcctggctgatgcaggtggaacgctgttcacccttctccatcatcgcggtg
acctttaccaacaaggcggcggccgagatgcgcggccgggtcgagaaggtgatcggtgac
ggcgtgcgcggcatgtggatcggtaccttccacggcatcgcccaccgcctgctgcgggcc
caccatctggatgcggggctgccgcaggatttccagatcctcgactccgacgaccagtac
cggctcatccgccgggtgctcaaggcgctcaacctcgacgagaagcactgggccccgcgc
gccgtgatgggctatatcaacggcaagaaggacgaggggctgcgccccggcgacatcgac
ctctacggcgatcccgtcacccgcacctatcagcagatctacaagacctatcaggagacc
tgcgatcgctccgggctggtggattttgccgagctgctgctgcgcgcccacgagctgtgg
ctgaacaagccgcacatcctcgagcactaccgcgatcgcttccagaacatcctggtggac
gagttccaggataccaacggcatccagtacgcctggctgcggatgctggccggcgacacc
ggcaaggtgatgatcgtcggcgacgatgaccagtccatctacggctggcgcggcgccaag
atcgagaacatccagcgcttcctgaccgactatcaaggggccgagaccatccgcctcgag
cagaactaccgctccaccgccaacatcctgaaagcggccaactgcgtcatcgccaacaac
gccgagcgccttggcaaggagctgtggaccgagggcgccgagggcgagccgatttcgctg
tacgccgccttcaacgaggtggacgaggcccgcttcgtggttggccgcctcaaggactgg
aaagagaagggcggcttgctcgccgactgcgccatcctctatcgctccaacgcccagtcg
cgggtgctggaagaggcgctgatgcaggacgccatgccgtaccgcatctatggcggcctg
cgcttcttcgagcgccaggaaatcaaggacgccatggcgtacctgcgccttatcaacaac
cgtggcgacgacgccagcttcgagcgggtggtcaataccccgacccgcggcatcggcgat
cgcaccctcgagatactgcgaaacaacgcccgcgatcagggccagaacctgtggcagtcc
gccaaggccctgctgggtgacaaggtgctgaccggccgcgccggcaacgcggtgcgcggt
tttgttgatctcatcgacgcgctggaggagcaggtctccctgctgccgctgcaccagcag
gcggatatcgccatccagcactccggcctcaaggcgatgtatctggcggaaaaaggcgag
aaatcccaggcgcgggtggagaacctggacgaactggtcaccgcctgccgccagtaccag
cgcccggacgagctggaagacatgagcgatctctccgccttcctcgcccacgcggcgctg
gaatccggcgagaatcaggcggacgaatatgccgacgcggtgcagctgatgaccctgcac
agtgccaagggcttggagttcccgctggtgctgctggtcggcgtggaagaaggcatgttc
cccagccagcaatcgaccgaggagtcgggccggctggaagaggagcgccgcctctgttac
gtcggcatgacccgcgccatggagaagctctacatctgttatgcggagagccgccgcatc
tacggccgcgagatgttccacaagccgagccgctttatccgcgagatgcccgccgagtgt
ctggaagagatccggctgcgcacccaggtgagccgtcccacccagtacggccgctttagc
cagaacgaggtgcagcagagcttcgacgccagcggcatcaagctcggccagcgggtgctc
catccgaaattcggggaaggcatagtgctcaacttcgaaggggtcggccagcagagccgg
gtgcagatccagttcgacgacgtcggcgccaagtggctggtcaccgcttacgcgagattg
gagactctttag
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