Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_1046
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Entry
AHA_1046 CDS
T00424
Name
(GenBank) helix-turn-helix, AraC type:HhH-GPD:Ada, metal-binding:AlkA, N-terminal
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Pathway
aha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AHA_1046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aha03000
]
AHA_1046
03400 DNA repair and recombination proteins [BR:
aha03400
]
AHA_1046
Enzymes [BR:
aha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AHA_1046
Transcription factors [BR:
aha03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AHA_1046
DNA repair and recombination proteins [BR:
aha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AHA_1046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_Tnp_ISL3
HHH
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
ABK36149
UniProt:
A0KH38
LinkDB
All DBs
Position
complement(1127993..1129558)
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AA seq
521 aa
AA seq
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MPTDHAMTMSPTTGDEAGLPLSAEQCHAARLARDARFDGRFFTGVLSTGIYCRPVCPARP
PHEHNVRYFQSAAAAEQHGLRPCLRCRPELAPAAPGDLPPTLARLLSRIDRGELAEGSLT
TLAEQAGISERTLRRQFEQHLGASPKQVEQTRRLLLAKRLLTETRLPITDIAFAAGFASI
RRFNDAWQQAYGLAPRALRRQSESTGDDAALTQAEPQTEEGAMLTLQLPYRPPYDVAAML
AFYRLRAIPGLERVDGEVYERWHRVGDQVARVRISQGKGHSLLLSVHDLPPAALPDLLYR
VRRMWDLDADMQRIGARLGQDPLLASLQARWPGVRLPAGWDEYEVMLRAIVGQQVSVKGA
ITILGRLVARTEAQFGMAQLPTPAQLCELNLDGIGMPGSRIRTLQGLAQALASGELSLIS
ASDEQLLALPGIGPWTVAYWRLRCGLDPDAFPASDLVLLKALGGGTKLPVKAVLAHSERW
RPWRGYAASWLWHAMSEEPALLTESAPGRAASDNQAEETTP
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagatcacgccatgacgatgtcgccgaccacaggggatgaggcaggcctgccg
ctcagcgccgagcagtgccatgccgcccgcctggcccgcgatgcgcgcttcgacggccgc
ttctttaccggcgtgctctccaccggcatctactgccggcctgtttgtccggcgcggccg
ccacacgagcacaacgtgcgctacttccaaagcgccgccgcagcggagcagcacggccta
cgtccctgcctgcgctgccggccggagctcgcgcccgccgcccccggcgatctgccgccg
acgctggcgcgcctgttatcccggatcgatcgcggcgagctggcggaaggctcgctcacc
acgctggcggaacaggccggcatcagtgagcgcacgctgcgccgccagttcgagcagcac
ctcggcgcctcgccgaaacaagtggagcagacgcgccggctgctgctcgccaagcggctg
ttgaccgaaacccggctgcccatcaccgacatcgcgtttgcggcgggctttgccagcatt
cgccgcttcaacgacgcctggcagcaagcatacgggctggcgccgcgggcgctgcgccgt
cagagcgagtcaaccggcgacgacgccgccctgacgcaagctgaaccacagaccgaggag
ggggcaatgctcacgttgcaactgccctaccgccccccgtacgacgtggcggccatgctg
gcgttctaccggctgcgcgccattccggggctggagcgggtagatggcgaggtctatgaa
cgctggcaccgggtcggcgatcaggtcgcgcgggtgcgcatcagccagggcaaggggcac
agcctgctgctcagcgtccatgatttgccgcccgccgcgctgccggatctgctgtatcgg
gtgcgccggatgtgggatctcgatgccgacatgcagcgcatcggtgcgcggctcgggcag
gatccgctgctggcgagcctgcaggcgcgctggccgggggttaggctgcccgccggctgg
gatgagtacgaggtgatgctgcgtgccatcgtcggccagcaggtatcggtcaagggggcc
atcaccatactcggacggctggtggcgcgcaccgaggcgcaattcgggatggcgcagttg
cccacccctgcccagctgtgcgaactcaatctggacggtatcggcatgcccggcagccgg
atcagaacgctgcaggggctggcacaggcgctggccagcggcgagttgagcctgatcagc
gctagcgatgaacaactgctggcactgcccggtatcggcccctggacggtcgcctactgg
cggctgcgctgcggactggacccggatgccttccccgcctcggatctggtgctactgaag
gcgctggggggcggcaccaagttgccggtaaaagcggtattggcccacagcgaaaggtgg
cggccctggcgcggctacgcggcgagctggctgtggcatgcaatgagtgaagagccggct
ctgctgaccgagtcggcaccaggccgcgcagcaagcgacaaccaagcagaggagacaacc
ccatga
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integrated database retrieval system
