Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_1318
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Entry
AHA_1318 CDS
T00424
Name
(GenBank) LysM domain protein
KO
K19236
L,D-transpeptidase YcfS
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Pathway
aha01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
AHA_1318
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aha01002
]
AHA_1318
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aha01011
]
AHA_1318
Peptidases and inhibitors [BR:
aha01002
]
Cysteine peptidases
Family C82
AHA_1318
Peptidoglycan biosynthesis and degradation proteins [BR:
aha01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AHA_1318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
ABK37432
UniProt:
A0KHV8
LinkDB
All DBs
Position
complement(1431614..1432531)
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AA seq
305 aa
AA seq
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MFIARTLSLLALAASLLTAPVLATTYPLPPAGSRLIGELEDYIVQPDEHLELIGKHTQIG
FLALLEANPGVDPYLPKPGTRLTLPTQMLLPNVPREGIVINLPELRLYYFPKGKNEVMVL
PIGIGDIGRETPEMTTTVIAKNPNPTWVPGPMVRKSWLEQKGITLPAVVPPGPDNPLGKF
AMRLGYGKQDYLIHGTNKDFGVGLRVSAGCIRLRPDDIEALFKIVPIGTQVRVINQPVKT
AIEPDGRHWLEVHSPLSRTELELEQGAPLILSPEVEAFIAKPEVDGDKAAGVLNSKNGIP
RPVSG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgttcatagcacgaaccctctcattgctggcgctggccgccagcctgctgacggctccg
gtcctcgccaccacctatccgctgcccccggcaggcagccgcctgatcggcgaactggag
gactacatagtccagccagatgaacatcttgagctcatcggcaagcacacccagattggt
tttctggcgctgctcgaagccaatccaggggttgacccctatttaccaaaaccgggcacc
cggctgaccctgccaacccagatgctgctgccgaatgtgcctcgcgagggcatcgtcatc
aatctgccggagctgcgcctctactacttcccgaaaggcaaaaacgaagtgatggtgctg
cccatcggcattggcgacatagggcgggagacgcctgagatgaccaccacagtgatcgcc
aagaaccccaatccgacctgggtgcccggccccatggtgcgcaagtcctggctggagcaa
aaggggatcaccctgccggcggtggtgccgcccggtcccgacaatcccctcggcaagttc
gccatgcgcctcggttatggcaagcaggactacctcatccacggcaccaacaaggatttt
ggcgtcggtctgcgggtcagcgccggctgcattcggttgcgccccgacgacatcgaggcc
ctgttcaagattgtccccatcggcactcaggtgcgggtgatcaaccagccggtcaaaacc
gccatcgagcccgatggccgtcactggctggaggtgcactccccgctctcccgtaccgaa
ctggagctggaacagggcgccccattgatcctctcccctgaggtggaggccttcatcgcc
aaaccggaagtcgatggtgacaaggccgccggcgtgctaaacagcaagaacggtatcccc
cgtcccgtcagcggctga
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