Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_1628
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Entry
AHA_1628 CDS
T00424
Name
(GenBank) ribosomal large subunit pseudouridine synthase F
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aha03009
]
AHA_1628
Enzymes [BR:
aha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
AHA_1628
Ribosome biogenesis [BR:
aha03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AHA_1628
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
ABK37628
UniProt:
A0KIR3
LinkDB
All DBs
Position
1777349..1778383
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AA seq
344 aa
AA seq
DB search
MLADESMRLNKYISESGICSRREADRFIEQGNVFINGKRAGVGDQVFAGDLVKVNGQVIE
PREADSLVFIVLNKPVGIVSTTEAGEKDNIVDFVNHSTRIFPIGRLDKDSQGLIFLTNHG
DLVNKILRAGNDHEKEYLVTVDKPVTDEFIRGMGAGVPILGAVTKKCKVKKEAPFVFRIT
LVQGLNRQIRRMCEHFGFEVTKLERIRIMNVSLKGLPVGEWRDLTDDELIELFKLIEDSS
SEVKPAKGGQAAAGQGGKPKASAAQAGKPAPGKKPRRDDDHEIGGRPNVPGPSAFESKSP
AGKGAAGKGGAAKGSAGKGAPNKGAKPAAGKPRAGQGGRQKKGR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgatgaatccatgcgcctgaacaaatacatcagcgagagcggcatctgctcg
cgccgcgaggccgaccgctttatcgagcagggcaacgtcttcatcaacggcaagcgggcc
ggggtgggggatcaggtgtttgccggggatctggtcaaggtcaacggtcaggtgatcgag
ccgcgcgaggcggacagcctggtcttcatcgtcctcaacaagccggtgggcatcgtctcc
accaccgaggcgggcgagaaggacaacatcgtcgacttcgtcaaccacagtacccgcatc
ttccccatcggccgactggacaaagactctcagggactcatcttcctgaccaaccacggc
gatctggtcaacaagatcctgcgggcgggcaacgatcacgagaaagagtatctggtgacc
gtggacaagccggtcaccgacgagtttattcggggcatgggcgccggggtgccgatcctg
ggtgccgtcaccaagaagtgcaaggtgaagaaagaggcgccgttcgtgtttcgcatcacg
ctagtgcaggggctgaaccgtcagatccgccgcatgtgcgagcacttcggcttcgaggtg
accaagctcgagcgcatccgcatcatgaacgtcagcctcaaggggctgccggtgggcgag
tggcgcgatctcaccgacgacgagctgatcgagctgttcaagctgattgaagactcctcc
tccgaggtgaaaccggccaaagggggccaagctgccgccgggcagggcggtaaacccaag
gcatccgccgcacaagccggcaagccggcaccgggcaaaaaaccgcgccgggatgatgat
cacgagattggcgggcgtcccaacgtgccggggccgtcggcattcgaaagcaagagcccg
gctggcaagggtgctgccggtaaaggcggcgcggccaaagggagcgcaggcaaaggcgcc
ccgaacaagggggccaaaccggccgccggcaaaccgcgcgccggtcagggtgggcggcag
aagaaggggcgctaa
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