Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_1842
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Entry
AHA_1842 CDS
T00424
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aha03000
]
AHA_1842
Transcription factors [BR:
aha03000
]
Prokaryotic type
Helix-turn-helix
Other families
AHA_1842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
HTH_8
AAA_16
AAA_2
AAA
Torsin
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
ABK35851
UniProt:
A0KJC5
LinkDB
All DBs
Position
2010521..2012059
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AA seq
512 aa
AA seq
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MEQALAFSLALTAQRDEPHLCHWWSSTVHASFQPRGLLLGMLDVSGRQLECQGWVRGKEV
ALGLAVDDFSHPLAYVLHKAQSRTWDSLYGGARIEHAGFRALLANLGQQCGLHAYPLLDG
NGKPFAVLALMDEGEVLRAWADGPELAQLSQVFCNQLTLIRDLGRSRRDQGVLRDSLRQM
KGEGERLRQHEKLLGDQLVGQSAVIRGLREQINQAGQHKLTVLIQGETGSGKEVVARLVH
QCSDRANKPFVAINCAAIPENLIESELFGYQKGAFSGALANKTGLVAQANGGTLFLDEVG
DMPAAMQAKLLRVLETRSYRPLGAEQEYHSDFRLIAATHQPLTRHVEEGQFRADLYHRLC
QCLLLIAPLREHMDDVPLLCQHFMAQFAAQDGKTLVGLQRKFLKQLQTYDFPGNVRELRN
LLEVACAHTRHGEEVGLEALPPELRERVSALLPSSMDDYNHIRDLRRAMQQYEASVIEAR
LRHFQGNRMLVAESLNIPKRTLDHKCQKLEVN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagccctcgcattttccctggccctcaccgcccagcgcgatgagccacacctg
tgccactggtggagctcgaccgtccatgccagcttccagcccagggggctgctgctcggc
atgctggatgtgagcggccgccagctggagtgccaaggctgggtcagggggaaggaggtg
gcgctggggctggcggtggacgatttttcccacccccttgcctatgtgctgcacaaggcc
cagtcccgtacctgggactccctctacggcggtgcccgcatcgagcacgccggttttcgc
gcactgctggccaaccttggccagcagtgcgggctgcacgcgtatccgctgctggatggc
aacggcaagccgtttgccgtgctggccctgatggatgaaggggaggtgctgcgggcctgg
gccgacggccccgagctggcccagctctcccaggtcttttgcaaccagctcaccctcatt
cgcgatctcggtcgcagtcggcgggatcagggggtactgcgcgactccctgcgccagatg
aagggggagggggagcggctgcgccagcacgagaagctgctcggcgatcagctggtcggc
cagtcggcggtgatccgcgggctgcgcgagcagatcaaccaggccggccagcacaagctg
accgtgctgatccagggggagaccggcagcggcaaggaggtggtggcacggctggtgcac
cagtgctccgatcgcgccaacaagccgtttgtcgccatcaactgcgccgccatcccggag
aacctcatcgagagcgagctgtttggttaccagaagggagccttctccggcgcccttgcc
aacaagaccgggctggtggcccaggccaacggtggcaccctgtttctggacgaggtgggg
gacatgcccgctgccatgcaggccaagctgctgcgggtgctggaaacccgcagttaccgg
ccgctcggggccgagcaggagtatcactccgattttcgcctcatcgccgctacccatcag
ccgctcacccgacatgtggaggaggggcagtttagggccgacctctaccaccgtctctgt
cagtgcctgctgctgattgcccccctgcgcgaacacatggatgacgtgccgctgttgtgc
cagcacttcatggcccagtttgctgcccaagatggcaagaccttggtggggctgcagcgc
aagttcttgaaacagctgcagacctatgacttccccggcaacgtgcgcgagctgcgcaac
ctgctggaggtggcctgcgcccatacccgtcacggggaggaggtggggctggaggcgctg
ccgccggagctgcgcgagcgggtcagcgccctgctgccctcttccatggacgactacaac
cacatccgcgatctgcgccgggccatgcagcagtatgaggcttccgtcatcgaggcgcgg
ctgcgccacttccagggcaatcggatgctggtggccgagagcctcaacattcccaagcgc
accctggatcacaagtgccagaaactggaggtgaactga
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