Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_1983
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Entry
AHA_1983 CDS
T00424
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Pathway
aha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AHA_1983 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aha03400
]
AHA_1983 (xseA)
Enzymes [BR:
aha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AHA_1983 (xseA)
DNA repair and recombination proteins [BR:
aha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AHA_1983 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_M29
Motif
Other DBs
NCBI-ProteinID:
ABK39265
UniProt:
A0KJR3
LinkDB
All DBs
Position
complement(2178725..2180089)
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AA seq
454 aa
AA seq
DB search
MNYRNEPSQSRQQQVFTVTRLNSAVRMILEQDLGLVWLTGELSNLAMPSSGHWYFSLKDM
SAQVRCAMFKGNNRRVAFRPQDGMQVLVQARVSLYEPRGDYQLIIESMQPAGDGVLALRF
EELKRRLGAEGLFDEGRKRPLPREPRAVGLITSATGAALHDMLTVLRRRAPDLPVFIYPT
QVQGSAAIGQIVSAIALANRRAEVDVLIVGRGGGSLEDLWCFNEEAVARAIAHSAIPVVS
AVGHEVDVTISDFAADLRAPTPSAAAELVAPDQSARAQRLAHLKQQLLQAMNRQQTAARH
DFILLQKRLDHQDPKRRLEQQSQRLDELSARLQQLMNHKLHQGERRLANLELRLQGKSPE
RLLAAGKRRHQLAEERLHALIAKRRDLADHRLAMLSARLDGVSPLATLGRGYSITRTQSG
EVISRATQVDAGQTLVTQLAEGQLWVRVEEVHQP
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgaactaccgcaacgaaccgagtcaaagcagacaacagcaggtctttaccgtcacccgc
ctcaacagcgccgtgcgcatgatcctggagcaggatctggggctggtgtggttgaccggc
gagctctccaacctggcgatgccaagctccggccactggtacttctcgctcaaggacatg
tcggcccaggtgcgctgcgccatgttcaagggcaacaaccggcgggtggccttccgcccg
caggatggcatgcaggtgctggtacaagcgcgggtctcgctttatgagccgcgcggcgac
taccagctgatcatcgaatcgatgcagccggcgggcgacggcgtgctggcgctgcgcttt
gaggagctcaagcgccgcctcggcgccgaggggttgtttgacgaagggcgcaagcggccg
ctgccgcgtgaaccgcgcgcggtgggcctcatcacctccgctactggtgctgccctgcac
gacatgctgacggtgctgaggcgccgcgcgccggatctgccggtgtttatctacccgacc
caggtgcagggcagcgccgccatcggccagatcgtctctgccattgccctggccaaccgc
cgcgccgaggtggatgtgctgatcgtcgggcgcggcggcggctcgctcgaagatctctgg
tgcttcaacgaagaggcggtggcgcgcgccatcgcccactccgccatcccggtggtgagc
gcggtaggccacgaggtggacgtcaccatcagcgactttgccgccgacttgcgcgccccg
accccgtcggcggcggccgaactggtggcgccggatcagagcgcccgtgcccagcgcctc
gcccatctcaagcagcaactgctgcaggcgatgaaccgccagcagaccgctgcccgccac
gatttcatcctgctgcaaaagcggctcgaccatcaggatccgaagcggcggctggagcag
caatcccagcgcctcgacgagctctccgcccgcttgcagcagctgatgaaccacaaactg
catcagggggagcggcgcctcgccaatctggagctgcgcctgcagggcaagagcccggag
cgcttgctggccgccggcaagcgtcgccatcagctggccgaggagcgcctccatgccctc
atcgccaaacgccgggatctggccgaccaccgcctcgccatgctcagcgcccgcctcgac
ggggtgagcccgctcgccaccctggggcgcggctactccatcacccgcacccagagcggt
gaggtgatcagccgcgccacccaggtcgatgccggccagacgctggtaacccagcttgca
gaggggcagctgtgggtgcgggtggaagaggtccaccagccataa
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