Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_2257
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Entry
AHA_2257 CDS
T00424
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Pathway
aha03030
DNA replication
aha03430
Mismatch repair
aha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AHA_2257 (holB)
03430 Mismatch repair
AHA_2257 (holB)
03440 Homologous recombination
AHA_2257 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aha03032
]
AHA_2257 (holB)
03400 DNA repair and recombination proteins [BR:
aha03400
]
AHA_2257 (holB)
Enzymes [BR:
aha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AHA_2257 (holB)
DNA replication proteins [BR:
aha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AHA_2257 (holB)
DNA repair and recombination proteins [BR:
aha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AHA_2257 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_5
RNaseH_pPIWI_RE
Mg_chelatase
SDR-like
QueC
nSTAND3
Ribosomal_L29
Motif
Other DBs
NCBI-ProteinID:
ABK37665
UniProt:
A0KKI0
LinkDB
All DBs
Position
2490155..2491102
Genome browser
AA seq
315 aa
AA seq
DB search
MYPWLIPDWHALSQTAAAGRLGHAWLLLGDPGLGKEQLAEQLARLHLCHRPERGEPCGQC
HSCQLFEKGHHPDLGTLTTESKTIGVEAIREICSRLQNSAQLGRGKVVIIPDAERMTESA
ANALLKTLEEPAGDSLLLLIASQVSRLLPTILSRCHKHVCQLPAEGETVRWLAEQGHQAT
LAQVRICQGAPLRVLRYIEEQQDSARRDLLESFLALAQTPTRANHVCGLLASDTQVRLHW
LQLFLCDALKTQAGCGHHQLAMPDLTALSLQLAELHSSEKLLEAEQQLVELKMACQPGQL
SNPTIHLMNWLTRWL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtatccctggttgatcccggactggcatgccttgagccagaccgctgcggccggtcga
ctcggtcacgcctggttgctgctcggcgatcccggtcttggcaaggagcagcttgcggaa
caattggcgcgcttgcacctttgccatcggcccgaacggggtgagccttgtggtcaatgt
cactcctgccagctgtttgagaagggccatcatccggatctcggcaccctgacgacggag
agcaagaccatcggggtcgaggccattcgcgagatctgttcgcgcctgcagaattcggcc
cagcttggtcgcggcaaggtggtgatcatcccggatgcggagcgcatgacggagtcggcc
gccaacgccctgctcaaaaccctggaagagcctgccggcgacagcttgctgctgctgatc
gcctcccaggtttcccgcctgctgccgaccattctcagtcgctgtcacaaacatgtctgc
cagttgcctgccgagggtgagacggtgcgctggctggccgagcagggtcatcaggccacg
ctggcccaggtacggatctgccagggggcgccgctgcgggtgctgcgctatatcgaagag
cagcaagacagtgcccgccgggatctgctggagagttttcttgcgctggcacagacgccg
acccgggccaaccacgtgtgcggtctgctggcgagcgatacccaggtcaggctgcactgg
ctgcagctgttcttgtgcgatgccctcaagacgcaggccggttgtggccatcatcagctg
gcgatgccggacctgacggcgctcagcctgcagctggccgagcttcattccagcgagaaa
ctgctggaggcggagcaacagctggtcgagctgaagatggcctgccagccgggacagctc
tccaatcccaccatccatctgatgaactggctgactcgctggttataa
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