Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_3045
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Entry
AHA_3045 CDS
T00424
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aha03400
]
AHA_3045
DNA repair and recombination proteins [BR:
aha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AHA_3045
Archaeal homologous recombinant proteins
AHA_3045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
ABC_ATPase
MMR_HSR1
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABK39691
UniProt:
A0KMP6
LinkDB
All DBs
Position
complement(3431598..3435353)
Genome browser
AA seq
1251 aa
AA seq
DB search
MKILSLSGENLASLTGQFTIDFAGGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRVWLARWAVRRAR
NRAEGRFQAQERSLTDVASGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL
KSSADERSALLERMTGTELYSAISIQTHERAREEQQKLAAIGQRLGDVALMDEATREQWV
SQQVSLATSLKHEQQQQQLMQDLRDLNGRIAAQLQACQEGEAALAAAEAAHGAAAPEREE
FARAEQAQVARADHDELARLTLEVQQQEKALAELGPELGKLEEQTQQSALTEQQLLAKKI
AAEREWGALQPELKRAQELDTRIREKQQQLQKIQQEGAQEREVQLTLEQGWRQQRQQVEQ
LKAQHQQWGAWLEEHKELAPVARQWQPLLTAMQDWAEDADRLQQLLTLREHKLRALRQLQ
HQLEQGQQERDYWQREQERLQQQQHELQEQQWEGRLVKAQEQWQGQTEQLGQLRQLLELA
DYGHNHGEQHGRLQQEIAQLEQALGKLAILGDELTPARERLALQRDEARHALEQSRAIAS
FEQHRHILRDGEPCPLCGAEEHPYHQSQPQVAGILGQLAERVRSLELEWERLNHQYIQCE
SERQELARQLAVRQQHLPELETRAEQLTQRWQQLGGAELLGHPLPLRQRPIEWNELMSTL
LGRGQSLEQGLARSQQQLREAQQGQQQLQAVRQQLSQLTSQHQQFEQQWQEADRQRIALE
GEVKAMGEQETTLRQRLEQGGSRLDEQMGGQPWRQWLGSQQWHEWQRACEAWLHGQSEWE
RLTGEIASLTPALSAQEARLQTQRELLHKLERDYKEHEQQRQGLVTSRATCLGGEEIAQV
EIRWQQRLQQLASELETMQGAARALRERQTELKTRLSHLEQEKQVSSRRRREVLGRWAAH
ASSLGIAEYDLRRLLAMSPDELKARRAALQALEDARAEARTRLTERQRALALEESKRDRY
REHHPELAALAPQELDSRLTALEAHCRALDEQLFQCKSTLAQAEAAALKAGSLQEELAAQ
QAVADHWQRLCDLIGSASGAKLRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLA
LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS
LDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQVRVEALGGGESRVVLPG
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttgtcgctgtcaggggagaatctggccagcctgaccggtcaattcaccatc
gactttgccggtggtgccctgggggccgccggcctgtttgccatcaccggtaataccggc
gccggcaagagtaccctgctcgatgccatctgtctggcgctctacgacgagatgccgcgc
tttatcgccaatcgcaagaacgtcgccgaagtgggccgcatggatgacgaggagaagctc
aaggccaacgacgtgcgcggcatcctcagccgcggccatgccagcggtttcgccgaggtg
cagtttcgcggctgtgacggccgcgtctggctggcccgctgggcggtgcgccgtgcccgc
aaccgcgccgaggggcgctttcaggcccaggagcgcagcctgaccgacgtggcgtcgggc
caggtgttcagtggcagtaagcgggagctgcaggatcgtatcgacgagctggtgggactc
tcctgggagcagtttcgccgcgccgtcatcctgccgcagggagagtttgccgccttcctc
aaatcgagcgccgacgagcgttcggccctgctcgaacggatgaccggcactgagctctac
tccgccatctcgattcagacccatgaacgggcgcgggaggagcagcagaaactggccgcc
atcggccagcggctcggcgacgtggcgctgatggacgaggcgacccgcgagcagtgggtg
agccagcaggtgagcctcgctaccagcctcaagcacgagcagcagcaacagcagctgatg
caggacttgcgcgatctcaacggccgcatcgccgcgcagttgcaggcctgtcaggaggga
gaggcggcccttgccgcggccgaggcggcccatggtgcggccgcccccgagcgggaggag
ttcgcccgcgccgagcaggcccaggtggcccgcgccgatcacgacgagctggctcgtctc
accctggaagtgcagcagcaggagaaggcgctggccgagcttggccccgaacttggcaag
ctggaggagcagacccagcagagcgccctcaccgaacagcaactgctggcgaagaagatc
gccgccgagcgcgagtggggcgccctgcagcccgaactcaaacgggcgcaggagctcgac
acccgcattcgggaaaagcagcagcaactgcagaagatccagcaggagggggcacaggag
cgggaggtgcagctcaccctggagcagggctggcgccagcagcgccagcaggtggaacag
ctcaaggcccagcaccagcagtggggtgcctggcttgaggagcacaaggaactggcaccg
gtggcccgccagtggcagcccctgcttaccgccatgcaggattgggccgaggatgccgac
aggctccagcagctccttaccctgcgcgaacacaagctgcgcgccctcaggcaactgcaa
caccagctggagcaggggcagcaggagcgtgactactggcagcgcgagcaggagcggctg
cagcagcaacagcacgagctgcaggagcagcagtgggaggggcgtctggtcaaggcgcag
gagcagtggcaagggcagaccgagcagctgggccagctgcgccagttgctggagctggcc
gactatggccacaatcacggcgagcagcatggtcgcctgcagcaggagatcgcccagctg
gagcaggcgctcggcaagctggccatcctcggcgacgagctgacgccggcccgcgagcgg
ctcgccctgcagcgggacgaggcgcgtcacgcgctggagcagtcccgtgccatcgccagt
ttcgagcagcatcgccatatcctgcgcgacggcgaaccttgcccgctctgcggcgccgag
gagcacccctatcaccagagccagccacaggtggcgggcattctggggcaactggcggag
cgcgtccgcagcctggagctcgagtgggagcggctcaatcaccaatacattcagtgcgag
agcgagcgccaggagctggcccgtcagctggcggtgcgccagcaacatctgcctgagctg
gagacgcgcgccgagcagctgacccagcgctggcagcagctgggcggtgccgagctgctg
ggccatccgttgccgctgcgtcagagaccgatcgagtggaacgagttgatgagtaccctg
ctcggccgcggccagagcctggagcaggggctggctaggagccagcagcaactgcgcgag
gcccagcaggggcagcagcagttgcaggccgtgcgccagcagctgagccagctgaccagc
cagcaccagcagttcgagcagcagtggcaggaggccgatcgccagcgcatcgccctggaa
ggggaggtgaaggcgatgggcgagcaggaaacgaccctgcgccagcgccttgagcagggg
ggaagccggctcgacgagcagatgggaggccagccctggcgtcagtggctgggcagccag
cagtggcacgagtggcagcgggcctgcgaggcctggctgcacggccagagcgagtgggag
cggctgaccggcgagattgccagcctcaccccggccctgagcgcccaggaggcgcgcctg
cagacccagcgcgagctgctgcacaagctcgagcgcgactacaaggagcatgaacagcaa
cgacaggggctggtcaccagccgcgccacctgtctggggggcgaggagattgcccaggtc
gagatccgctggcagcagcggctgcagcagctggcgagcgagctggagacgatgcagggg
gcggcccgcgccttgcgcgagcgccagaccgagctcaagacccgtctcagccatctggag
caggagaagcaggtgagcagccggcggcgacgggaggtgctggggcgctgggctgcccac
gccagcagcctcggcatcgccgaatatgacctgcgccgcctgctggccatgagcccggat
gagctcaaggcgcgccgcgccgccttgcaggcgctggaggatgcccgcgccgaggcgcgt
acccgtctgaccgagcggcagcgggcgctggcgctggaggagagcaagcgagatcgttac
cgcgagcatcaccccgagctggccgcgttggcgccacaggagctcgacagccggctgacg
gcgctggaggcgcactgccgcgccctcgacgagcagctgttccagtgcaagagcacgctg
gcccaggccgaggcggcggccctcaaggcgggttctttgcaggaggagctggccgcccag
caggcggtggcggatcactggcagcggctctgtgatctcatcggttcggccagcggcgcc
aagctgcgtaccttcgcccagagcctcacgctggaacggctgctgctggaggccaacgcc
cagctcgccgagctctccccccgctatcgactggagcgggtgcccggcaccgatctggcg
ctgcaggtggtggatctcgacatgggggacgaggtgcgctcggtggactccctctccggc
ggtgagagcttcctggtgtcgctggcgctggcgctggccctctccagcctgtcgtcgcgc
cagacccaggtcgaatcgctctttatcgacgagggcttcggcaccctggatcccgacagc
ctggatctggcgctctcaagcctggattccctgcaggcggccggccgccagatcggggtc
atctcccacgtgcagaccctggtggagcggatcggcgtgcaggtgcgggtggaggccctc
ggcggcggcgaaagccgggtggtactgcccggctga
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integrated database retrieval system
